RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 MRPL9Q9BYD2 267 aaKnown RBP12.66□□□□□ -0.38
NDUFA3-208ENST00000422029 INO80BQ9C086 356 aaPredicted RBP12.66□□□□□ -0.38
NDUFA3-208ENST00000422029 DHX33Q9H6R0 707 aaKnown RBP12.66□□□□□ -0.38
NDUFA3-208ENST00000422029 POLD4Q9HCU8 107 aa12.66□□□□□ -0.38
NDUFA3-208ENST00000422029 XPNPEP1Q9NQW7 623 aa12.66□□□□□ -0.38
NDUFA3-208ENST00000422029 CACNG4Q9UBN1 327 aa12.66□□□□□ -0.38
NDUFA3-208ENST00000422029 USP20Q9Y2K6 914 aa12.66□□□□□ -0.38
NDUFA3-208ENST00000422029 PRG3Q9Y2Y8 225 aaPredicted RBP12.66□□□□□ -0.38
NDUFA3-208ENST00000422029 MUC6Q6W4X9 2439 aa12.66□□□□□ -0.38
NDUFA3-208ENST00000422029 STK36Q9NRP7 1315 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 C2CD4DB7Z1M9 353 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 BAG4O95429 457 aaKnown RBP12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 ASGR2P07307 311 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 SRGAP2BP0DMP2 458 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 GCFC2P16383 781 aaKnown RBP12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 VCPP55072 806 aaKnown RBP12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 NHLH1Q02575 133 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 TMEM184AQ6ZMB5 413 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 FERMT3Q86UX7 667 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 SMG8Q8ND04 991 aaKnown RBP12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 PRSS33Q8NF86 280 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 B3GALT6Q96L58 329 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 MFSD14AQ96MC6 490 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 ZBP1Q9H171 429 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 AGPAT5Q9NUQ2 364 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 FAM86C1Q9NVL1 165 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 MIOSQ9NXC5 875 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 KLK14Q9P0G3 267 aa12.65□□□□□ -0.38
NDUFA3-208ENST00000422029 INO80B-WBP1J3KQ70 363 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 B4GALT5O43286 388 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 EPB41L2O43491 1005 aaKnown RBP12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 SPATA31D3P0C874 917 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 LIG1P18858 919 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 MCM7P33993 719 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 RFC5P40937 340 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 OR1G1P47890 313 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 MRE11P49959 708 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 CDC42EP1Q00587 391 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 CALCRLQ16602 461 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 CES5AQ6NT32 575 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 SPATA31D4Q6ZUB0 917 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 OTUD6AQ7L8S5 288 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 DDX53Q86TM3 631 aaKnown RBP12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 GLYCTKQ8IVS8 523 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 C4orf19Q8IY42 314 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 DIS3L2Q8IYB7 885 aaKnown RBP12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 KREMEN2Q8NCW0 462 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 NSUN7Q8NE18 718 aaKnown RBP12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 ST13P5Q8NFI4 369 aaPredicted RBP12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 URGCPQ8TCY9 931 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 SLC22A17Q8WUG5 538 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 CASP10Q92851 521 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 PGBD4Q96DM1 585 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 ZFP42Q96MM3 310 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 FAM193BQ96PV7 902 aaPredicted RBP12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 GAD1Q99259 594 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 MTRQ99707 1265 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 JPH2Q9BR39 696 aaPredicted RBP12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 TMEM60Q9H2L4 133 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 TTC12Q9H892 705 aaPredicted RBP12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 RSAD1Q9HA92 442 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 GPRC5CQ9NQ84 441 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 LIMD1Q9UGP4 676 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 PCDHA12Q9UN75 941 aa12.64□□□□□ -0.39
NDUFA3-208ENST00000422029 POTEMA6NI47 508 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 NRP1O14786 923 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 TSPAN1O60635 241 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 DKC1O60832 514 aaKnown RBP eCLIP12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 ZNF623O75123 536 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 ERLIN2O94905 339 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 CTSAP10619 480 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 SKIP12755 728 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 ITGA4P13612 1032 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 AKAP5P24588 427 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 KLRC2P26717 231 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 MLH1P40692 756 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 SCNN1GP51170 649 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 ANKRD1Q15327 319 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 PTPN21Q16825 1174 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 TPRNQ4KMQ1 711 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 SRGAP1Q7Z6B7 1085 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 MRPL10Q7Z7H8 261 aaKnown RBP12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 WASF1Q92558 559 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 GTF3C6Q969F1 213 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 KLHL5Q96PQ7 755 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 POLR3FQ9H1D9 316 aaPredicted RBP12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 ADAM7Q9H2U9 754 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 PPP4R2Q9NY27 417 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 FAN1Q9Y2M0 1017 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 ARIH1Q9Y4X5 557 aaPredicted RBP12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 IPPQ9Y573 584 aa12.63□□□□□ -0.39
NDUFA3-208ENST00000422029 TBX3O15119 743 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 USO1O60763 962 aaKnown RBP12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 NPTXRO95502 500 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 BRD1O95696 1058 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms