RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 MRPL10Q7Z7H8 261 aaKnown RBP29.18■■■□□ 2.26
CDK9-202ENST00000421939 EIF2AQ9BY44 585 aaKnown RBP29.18■■■□□ 2.26
CDK9-202ENST00000421939 CSRNP2Q9H175 543 aa29.18■■■□□ 2.26
CDK9-202ENST00000421939 FZD8Q9H461 694 aa29.18■■■□□ 2.26
CDK9-202ENST00000421939 FBXO2Q9UK22 296 aaPredicted RBP29.18■■■□□ 2.26
CDK9-202ENST00000421939 HIP1RO75146 1068 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 PLA2G4BP0C869 781 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 AGMOQ6ZNB7 445 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 DAW1Q8N136 415 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 SYT2Q8N9I0 419 aaPredicted RBP29.17■■■□□ 2.26
CDK9-202ENST00000421939 CNNM3Q8NE01 707 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 RASSF8Q8NHQ8 419 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 DRC1Q96MC2 740 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 KIFC3Q9BVG8 833 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 TIPINQ9BVW5 301 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 MORC2Q9Y6X9 1032 aaPredicted RBP29.17■■■□□ 2.26
CDK9-202ENST00000421939 MYH15Q9Y2K3 1946 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 XIRP2A4UGR9 3374 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 CNTNAP2Q9UHC6 1331 aa29.17■■■□□ 2.26
CDK9-202ENST00000421939 ATG2AQ2TAZ0 1938 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 PRKCBP05771 671 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 NCLP19338 710 aaKnown RBP29.16■■■□□ 2.26
CDK9-202ENST00000421939 GUCY2CP25092 1073 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 SLC12A3P55017 1021 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 MAPK7Q13164 816 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 MAPK6Q16659 721 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 THNSL1Q8IYQ7 743 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 SPRYD3Q8NCJ5 442 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 SPPL3Q8TCT6 385 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 CCDC113Q9H0I3 377 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 INPP5FQ9Y2H2 1132 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 IPPQ9Y573 584 aa29.16■■■□□ 2.26
CDK9-202ENST00000421939 SRPRBQ9Y5M8 271 aaKnown RBP29.16■■■□□ 2.26
CDK9-202ENST00000421939 EFNA5P52803 228 aa29.15■■■□□ 2.26
CDK9-202ENST00000421939 KARSQ15046 597 aaKnown RBP29.15■■■□□ 2.26
CDK9-202ENST00000421939 NOMO2Q5JPE7 1267 aa29.15■■■□□ 2.26
CDK9-202ENST00000421939 SMG8Q8ND04 991 aaKnown RBP29.15■■■□□ 2.26
CDK9-202ENST00000421939 ZNF558Q96NG5 402 aa29.15■■■□□ 2.26
CDK9-202ENST00000421939 TRIM6Q9C030 488 aaPredicted RBP29.15■■■□□ 2.26
CDK9-202ENST00000421939 NSUN3Q9H649 340 aaKnown RBP29.15■■■□□ 2.26
CDK9-202ENST00000421939 RSAD1Q9HA92 442 aa29.15■■■□□ 2.26
CDK9-202ENST00000421939 KCND2Q9NZV8 630 aa29.15■■■□□ 2.26
CDK9-202ENST00000421939 SPTBN5Q9NRC6 3674 aaKnown RBP29.15■■■□□ 2.26
CDK9-202ENST00000421939 OFD1O75665 1012 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 FGF18O76093 207 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 CSPG5O95196 566 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 PLCG1P19174 1290 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 DMP1Q13316 513 aaPredicted RBP29.14■■■□□ 2.26
CDK9-202ENST00000421939 SLC39A14Q15043 492 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 FOXD4L5Q5VV16 416 aaPredicted RBP29.14■■■□□ 2.26
CDK9-202ENST00000421939 SLC27A1Q6PCB7 646 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 KCNT2Q6UVM3 1135 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 POF1BQ8WVV4 589 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 FOXD4L4Q8WXT5 416 aaPredicted RBP29.14■■■□□ 2.26
CDK9-202ENST00000421939 CCSER1Q9C0I3 900 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 MYO7AQ13402 2215 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 PLXNA4Q9HCM2 1894 aa29.14■■■□□ 2.26
CDK9-202ENST00000421939 A0A1B0GUA9 196 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 ZSCAN22P10073 491 aaPredicted RBP29.13■■■□□ 2.25
CDK9-202ENST00000421939 ITGA4P13612 1032 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 LIG1P18858 919 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 DNAJB1P25685 340 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 PPM1AP35813 382 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 NPTX2P47972 431 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 NASPP49321 788 aaPredicted RBP29.13■■■□□ 2.25
CDK9-202ENST00000421939 PEX3P56589 373 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 UBE3AQ05086 875 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 PRPF4BQ13523 1007 aaKnown RBP29.13■■■□□ 2.25
CDK9-202ENST00000421939 CAMK1Q14012 370 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 TCEAL5Q5H9L2 206 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 CDR2LQ86X02 465 aaPredicted RBP29.13■■■□□ 2.25
CDK9-202ENST00000421939 HACE1Q8IYU2 909 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 URGCPQ8TCY9 931 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 LRRC15Q8TF66 581 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 ATXN2LQ8WWM7 1075 aaKnown RBP29.13■■■□□ 2.25
CDK9-202ENST00000421939 C17orf75Q9HAS0 396 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 TBC1D13Q9NVG8 400 aa29.13■■■□□ 2.25
CDK9-202ENST00000421939 TTLL13PA6NNM8 815 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 CCDC169A6NNP5 214 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 ACKR2O00590 384 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 NPTXRO95502 500 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 PBX3P40426 434 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 RAD51AP2Q09MP3 1159 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 TMEM132AQ24JP5 1023 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 SPECC1Q5M775 1068 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 EPSTI1Q96J88 318 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 ZNF396Q96N95 335 aaPredicted RBP29.12■■■□□ 2.25
CDK9-202ENST00000421939 NXF3Q9H4D5 531 aaKnown RBP29.12■■■□□ 2.25
CDK9-202ENST00000421939 UBN1Q9NPG3 1134 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 BLOC1S4Q9NUP1 217 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 COG5Q9UP83 839 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 HES2Q9Y543 173 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 BRWD1Q9NSI6 2320 aa29.12■■■□□ 2.25
CDK9-202ENST00000421939 N4BP3O15049 544 aa29.11■■■□□ 2.25
CDK9-202ENST00000421939 RNASELQ05823 741 aaKnown RBP29.11■■■□□ 2.25
CDK9-202ENST00000421939 STK38Q15208 465 aa29.11■■■□□ 2.25
CDK9-202ENST00000421939 USP49Q70CQ1 688 aa29.11■■■□□ 2.25
CDK9-202ENST00000421939 KRI1Q8N9T8 703 aaKnown RBP29.11■■■□□ 2.25
CDK9-202ENST00000421939 SYMPKQ92797 1274 aaKnown RBP29.11■■■□□ 2.25
CDK9-202ENST00000421939 HLA-CQ95604 372 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms