RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 NLRP7Q8WX94 980 aa23.62■■□□□ 1.37
ABCF3-202ENST00000421340 PRIMPOLQ96LW4 560 aa23.62■■□□□ 1.37
ABCF3-202ENST00000421340 TMEM106CQ9BVX2 250 aa23.62■■□□□ 1.37
ABCF3-202ENST00000421340 MCOLN1Q9GZU1 580 aa23.62■■□□□ 1.37
ABCF3-202ENST00000421340 AGPAT3Q9NRZ7 376 aa23.62■■□□□ 1.37
ABCF3-202ENST00000421340 PRMT7Q9NVM4 692 aaPredicted RBP23.62■■□□□ 1.37
ABCF3-202ENST00000421340 DMAC2Q9NW81 257 aa23.62■■□□□ 1.37
ABCF3-202ENST00000421340 STYXL1Q9Y6J8 313 aa23.62■■□□□ 1.37
ABCF3-202ENST00000421340 CETN3O15182 167 aa23.61■■□□□ 1.37
ABCF3-202ENST00000421340 GNA14O95837 355 aa23.61■■□□□ 1.37
ABCF3-202ENST00000421340 COL6A1P12109 1028 aa23.61■■□□□ 1.37
ABCF3-202ENST00000421340 SPAG1Q07617 926 aa23.61■■□□□ 1.37
ABCF3-202ENST00000421340 ADAM9Q13443 819 aa23.61■■□□□ 1.37
ABCF3-202ENST00000421340 C1orf53Q5VUE5 145 aa23.61■■□□□ 1.37
ABCF3-202ENST00000421340 LRRC55Q6ZSA7 311 aa23.61■■□□□ 1.37
ABCF3-202ENST00000421340 FAM114A1Q8IWE2 563 aa23.61■■□□□ 1.37
ABCF3-202ENST00000421340 MRPL4Q9BYD3 311 aaKnown RBP23.61■■□□□ 1.37
ABCF3-202ENST00000421340 SAMSN1Q9NSI8 373 aaKnown RBP23.61■■□□□ 1.37
ABCF3-202ENST00000421340 MYH11P35749 1972 aa23.6■■□□□ 1.37
ABCF3-202ENST00000421340 KIAA0391O15091 583 aaKnown RBP23.6■■□□□ 1.37
ABCF3-202ENST00000421340 NR3C1P04150 777 aa23.6■■□□□ 1.37
ABCF3-202ENST00000421340 PRKCBP05771 671 aa23.6■■□□□ 1.37
ABCF3-202ENST00000421340 GARTP22102 1010 aa23.6■■□□□ 1.37
ABCF3-202ENST00000421340 MRPS6P82932 125 aaKnown RBP23.6■■□□□ 1.37
ABCF3-202ENST00000421340 KIZQ2M2Z5 673 aa23.6■■□□□ 1.37
ABCF3-202ENST00000421340 SLFN12LQ6IEE8 588 aa23.6■■□□□ 1.37
ABCF3-202ENST00000421340 CELF4Q9BZC1 486 aaKnown RBP23.6■■□□□ 1.37
ABCF3-202ENST00000421340 NOD1Q9Y239 953 aa23.6■■□□□ 1.37
ABCF3-202ENST00000421340 HTTP42858 3142 aa23.6■■□□□ 1.37
ABCF3-202ENST00000421340 MROH7Q68CQ1 1323 aa23.59■■□□□ 1.37
ABCF3-202ENST00000421340 LRRC10BA6NIK2 292 aa23.59■■□□□ 1.37
ABCF3-202ENST00000421340 INO80B-WBP1J3KQ70 363 aa23.59■■□□□ 1.37
ABCF3-202ENST00000421340 M0QZ92 97 aa23.59■■□□□ 1.37
ABCF3-202ENST00000421340 DARSP14868 501 aaKnown RBP23.59■■□□□ 1.37
ABCF3-202ENST00000421340 EIF4BP23588 611 aaKnown RBP23.59■■□□□ 1.37
ABCF3-202ENST00000421340 NR2F2P24468 414 aa23.59■■□□□ 1.37
ABCF3-202ENST00000421340 EEF1GP26641 437 aaKnown RBP23.59■■□□□ 1.37
ABCF3-202ENST00000421340 HSP90AA2PQ14568 343 aaPredicted RBP23.59■■□□□ 1.37
ABCF3-202ENST00000421340 FAM26DQ5JW98 314 aa23.59■■□□□ 1.37
ABCF3-202ENST00000421340 IRF2BP1Q8IU81 584 aa23.59■■□□□ 1.37
ABCF3-202ENST00000421340 SCLT1Q96NL6 688 aa23.59■■□□□ 1.37
ABCF3-202ENST00000421340 MINDY3Q9H8M7 445 aa23.59■■□□□ 1.37
ABCF3-202ENST00000421340 TRMT13Q9NUP7 481 aaKnown RBP23.59■■□□□ 1.37
ABCF3-202ENST00000421340 HNRNPDLO14979 420 aaKnown RBP23.58■■□□□ 1.37
ABCF3-202ENST00000421340 CDK11BP21127 795 aaKnown RBP23.58■■□□□ 1.37
ABCF3-202ENST00000421340 LIG4P49917 911 aa23.58■■□□□ 1.37
ABCF3-202ENST00000421340 TRIM71Q2Q1W2 868 aaKnown RBP23.58■■□□□ 1.37
ABCF3-202ENST00000421340 SARM1Q6SZW1 724 aa23.58■■□□□ 1.37
ABCF3-202ENST00000421340 SLC39A5Q6ZMH5 540 aa23.58■■□□□ 1.37
ABCF3-202ENST00000421340 TSHZ1Q6ZSZ6 1077 aa23.58■■□□□ 1.37
ABCF3-202ENST00000421340 BICD1Q96G01 975 aa23.58■■□□□ 1.37
ABCF3-202ENST00000421340 ACO2Q99798 780 aaKnown RBP23.58■■□□□ 1.37
ABCF3-202ENST00000421340 MKNK1Q9BUB5 465 aa23.58■■□□□ 1.37
ABCF3-202ENST00000421340 SENP6Q9GZR1 1112 aaPredicted RBP23.58■■□□□ 1.37
ABCF3-202ENST00000421340 TRPV2Q9Y5S1 764 aa23.58■■□□□ 1.37
ABCF3-202ENST00000421340 KAT6AQ92794 2004 aa23.58■■□□□ 1.37
ABCF3-202ENST00000421340 ANKRD63C9JTQ0 380 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 MAPK13O15264 365 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 SLC16A3O15427 465 aaKnown RBP23.57■■□□□ 1.36
ABCF3-202ENST00000421340 B4GALT4O60513 344 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 TOM1L1O75674 476 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 CD4P01730 458 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 MARSP56192 900 aaKnown RBP23.57■■□□□ 1.36
ABCF3-202ENST00000421340 RBL2Q08999 1139 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 PRPF4BQ13523 1007 aaKnown RBP23.57■■□□□ 1.36
ABCF3-202ENST00000421340 SNX17Q15036 470 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 AMHR2Q16671 573 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 SLC39A4Q6P5W5 647 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 ANKRD33Q7Z3H0 272 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 FAM126BQ8IXS8 530 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 ANKRD20A12PQ8NF67 263 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 TOX2Q96NM4 488 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 CDHR5Q9HBB8 845 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 MAGEC2Q9UBF1 373 aaPredicted RBP23.57■■□□□ 1.36
ABCF3-202ENST00000421340 SQORQ9Y6N5 450 aa23.57■■□□□ 1.36
ABCF3-202ENST00000421340 CLIC2O15247 247 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 IQCF3P0C7M6 154 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 ADSSP30520 456 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 NCBP1Q09161 790 aaKnown RBP23.56■■□□□ 1.36
ABCF3-202ENST00000421340 MGAT3Q09327 533 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 TMEM62Q0P6H9 643 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 TCP11X2Q5H9J9 407 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 ARMCX5Q6P1M9 558 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 DHX38Q92620 1227 aaKnown RBP23.56■■□□□ 1.36
ABCF3-202ENST00000421340 WNT8BQ93098 351 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 ZNF668Q96K58 619 aaPredicted RBP23.56■■□□□ 1.36
ABCF3-202ENST00000421340 TARS2Q9BW92 718 aaKnown RBP23.56■■□□□ 1.36
ABCF3-202ENST00000421340 TRPV6Q9H1D0 765 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 IKZF4Q9H2S9 585 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 KIAA1586Q9HCI6 787 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 LIMA1Q9UHB6 759 aaKnown RBP23.56■■□□□ 1.36
ABCF3-202ENST00000421340 TNFSF13BQ9Y275 285 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 CNTNAP2Q9UHC6 1331 aa23.56■■□□□ 1.36
ABCF3-202ENST00000421340 KCNJ18B7U540 433 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 TLR3O15455 904 aaKnown RBP23.55■■□□□ 1.36
ABCF3-202ENST00000421340 PROZP22891 400 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 SFPQP23246 707 aaKnown RBP eCLIP23.55■■□□□ 1.36
ABCF3-202ENST00000421340 AXLP30530 894 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 PSMC2P35998 433 aaKnown RBP23.55■■□□□ 1.36
ABCF3-202ENST00000421340 THPOP40225 353 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms