RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CABYRO75952 493 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 RGS20O76081 388 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 MMP3P08254 477 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 DESP17661 470 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 OSTNP61366 133 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 LAMTOR4Q0VGL1 99 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 LRMPQ12912 555 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 IRF5Q13568 498 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.05□□□□□ -1.12
BDNF-209ENST00000420794 LRRC8AQ8IWT6 810 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 PPM1KQ8N3J5 372 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 TARS2Q9BW92 718 aaKnown RBP8.05□□□□□ -1.12
BDNF-209ENST00000420794 SRRDQ9UH36 339 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 PASKQ96RG2 1323 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 RASSF10A6NK89 507 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 SEPT4O43236 478 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 ARIH2O95376 493 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 ATF7P17544 494 aaPredicted RBP8.05□□□□□ -1.12
BDNF-209ENST00000420794 GARTP22102 1010 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 PIK3CAP42336 1068 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 ZBED6P86452 979 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 TFAMQ00059 246 aaKnown RBP8.05□□□□□ -1.12
BDNF-209ENST00000420794 BEX3Q00994 111 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 KIF5AQ12840 1032 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 ARHGAP44Q17R89 818 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 TAF2Q6P1X5 1199 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 NFRKBQ6P4R8 1299 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 CCDC155Q8N6L0 562 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 SLAIN1Q8ND83 568 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 PDLIM2Q96JY6 352 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 RPS6KC1Q96S38 1066 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 RBAKQ9NYW8 714 aaPredicted RBP8.05□□□□□ -1.12
BDNF-209ENST00000420794 PARP2Q9UGN5 583 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 Q9Y3F1 56 aa8.05□□□□□ -1.12
BDNF-209ENST00000420794 KRT86O43790 486 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 SNAI1O95863 264 aaPredicted RBP8.04□□□□□ -1.12
BDNF-209ENST00000420794 AP3M2P53677 418 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 MFAP3P55082 362 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 RBL2Q08999 1139 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 SNRNP35Q16560 246 aaKnown RBP8.04□□□□□ -1.12
BDNF-209ENST00000420794 CCL14Q16627 93 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 IFI16Q16666 785 aaKnown RBP8.04□□□□□ -1.12
BDNF-209ENST00000420794 ATF7IP2Q5U623 682 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 CDKAL1Q5VV42 579 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 TWF2Q6IBS0 349 aaKnown RBP8.04□□□□□ -1.12
BDNF-209ENST00000420794 FOXR2Q6PJQ5 311 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 RNF169Q8NCN4 708 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 TRAPPC12Q8WVT3 735 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 RNF186Q9NXI6 227 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 CEP83Q9Y592 693 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 SBF1O95248 1867 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 COL1A2P08123 1366 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 TLR3O15455 904 aaKnown RBP8.04□□□□□ -1.12
BDNF-209ENST00000420794 TEX33O43247 280 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 EDIL3O43854 480 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 KIF4AO95239 1232 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 TUBB4AP04350 444 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 TNFAIP3P21580 790 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 GRK4P32298 578 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 SOX10P56693 466 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 ARHGAP1Q07960 439 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 BFSP1Q12934 665 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 NR1I3Q14994 352 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 ALS2CR12Q96Q35 445 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 TMEM106CQ9BVX2 250 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 APOL6Q9BWW8 343 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 WDR90Q96KV7 1748 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 TOM1L1O75674 476 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 ATG7O95352 703 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 PGK1P00558 417 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 ELNP15502 786 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 ZNF18P17022 549 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 VEGFBP49765 207 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 ZNF131P52739 623 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 GTF2BQ00403 316 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 ZFYVE27Q5T4F4 411 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 KRT39Q6A163 491 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 CCDC70Q6NSX1 233 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 CCDC62Q6P9F0 684 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 BZW2Q9Y6E2 419 aaKnown RBP8.04□□□□□ -1.12
BDNF-209ENST00000420794 PHIPQ8WWQ0 1821 aa8.04□□□□□ -1.12
BDNF-209ENST00000420794 EXTL3O43909 919 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 GCLMP48507 274 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 PMS1P54277 932 aaKnown RBP8.03□□□□□ -1.12
BDNF-209ENST00000420794 NOLC1Q14978 699 aaKnown RBP eCLIP8.03□□□□□ -1.12
BDNF-209ENST00000420794 MORN1Q5T089 497 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 SRGAP1Q7Z6B7 1085 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 ZNF410Q86VK4 478 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 MAP4K3Q8IVH8 894 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 CCAR2Q8N163 923 aaKnown RBP8.03□□□□□ -1.12
BDNF-209ENST00000420794 KIF18AQ8NI77 898 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 DHX33Q9H6R0 707 aaKnown RBP8.03□□□□□ -1.12
BDNF-209ENST00000420794 TMEM134Q9H6X4 195 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 LGR5O75473 907 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 NOP2P46087 812 aaKnown RBP8.03□□□□□ -1.12
BDNF-209ENST00000420794 GPC3P51654 580 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 TMEM62Q0P6H9 643 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 BMT2Q1RMZ1 405 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 CXCL17Q6UXB2 119 aa8.03□□□□□ -1.12
BDNF-209ENST00000420794 ZPBP2Q6X784 338 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms