RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 DDHD2O94830 711 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 CD2BP2O95400 341 aaKnown RBP12.29□□□□□ -0.44
SSBP3-206ENST00000420121 SKIP12755 728 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 XRCC6P12956 609 aaKnown RBP eCLIP12.29□□□□□ -0.44
SSBP3-206ENST00000420121 GLRA2P23416 452 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 TOB1P50616 345 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-206ENST00000420121 MBTD1Q05BQ5 628 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 ORC2Q13416 577 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-206ENST00000420121 NBR1Q14596 966 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 SAFBQ15424 915 aaKnown RBP eCLIP12.29□□□□□ -0.44
SSBP3-206ENST00000420121 ZNF174Q15697 407 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 NOMO2Q5JPE7 1267 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 TMEM184AQ6ZMB5 413 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 ZNF280BQ86YH2 543 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 NOSTRINQ8IVI9 506 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 MICAL1Q8TDZ2 1067 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 RSPH1Q8WYR4 309 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 CDCA3Q99618 268 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-206ENST00000420121 TCF25Q9BQ70 676 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 LRFN3Q9BTN0 628 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 VN1R3Q9BXE9 311 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 EIF2AQ9BY44 585 aaKnown RBP12.29□□□□□ -0.44
SSBP3-206ENST00000420121 TUFT1Q9NNX1 390 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 DNAJB4Q9UDY4 337 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 FAM50BQ9Y247 325 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 PLXNA3P51805 1871 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 DENND4AQ7Z401 1863 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 C2orf71A6NGG8 1288 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 INPPL1O15357 1258 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 GPR37L1O60883 481 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 ZC3H11AO75152 810 aaKnown RBP eCLIP12.28□□□□□ -0.44
SSBP3-206ENST00000420121 GALTP07902 379 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 OR52Z1P0C646 297 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 NCLP19338 710 aaKnown RBP12.28□□□□□ -0.44
SSBP3-206ENST00000420121 U2AF2P26368 475 aaKnown RBP eCLIP12.28□□□□□ -0.44
SSBP3-206ENST00000420121 SSTR3P32745 418 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-206ENST00000420121 TECP42680 631 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 SLC11A1P49279 550 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 MXD4Q14582 209 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-206ENST00000420121 ECM1Q16610 540 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 TTC38Q5R3I4 469 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 SYCE2Q6PIF2 218 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 POTEGQ6S5H5 508 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 GLB1LQ6UWU2 654 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 SUSD6Q92537 303 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 CPB2Q96IY4 423 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 POLR3CQ9BUI4 534 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-206ENST00000420121 NFKBIZQ9BYH8 718 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 ZBP1Q9H171 429 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 POLR3FQ9H1D9 316 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-206ENST00000420121 S1PR5Q9H228 398 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 NGRNQ9NPE2 291 aaKnown RBP12.28□□□□□ -0.44
SSBP3-206ENST00000420121 GPRC5CQ9NQ84 441 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 ENTPD7Q9NQZ7 604 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 DBR1Q9UK59 544 aaKnown RBP12.28□□□□□ -0.44
SSBP3-206ENST00000420121 INPP5FQ9Y2H2 1132 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 USP15Q9Y4E8 981 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-206ENST00000420121 TRIP11Q15643 1979 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 TECTAO75443 2155 aa12.28□□□□□ -0.44
SSBP3-206ENST00000420121 C2orf16Q68DN1 1984 aa12.27□□□□□ -0.44
SSBP3-206ENST00000420121 FAM86C2PA6NEL3 165 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 B4GALT5O43286 388 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 USO1O60763 962 aaKnown RBP12.27□□□□□ -0.45
SSBP3-206ENST00000420121 ARF4P18085 180 aaPredicted RBP12.27□□□□□ -0.45
SSBP3-206ENST00000420121 RPA1P27694 616 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 TRAPPC10P48553 1259 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 KRT17Q04695 432 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 RABEP1Q15276 862 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 PCBP1Q15365 356 aaKnown RBP eCLIP12.27□□□□□ -0.45
SSBP3-206ENST00000420121 TMC7Q7Z402 723 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 MRPL43Q8N983 215 aaKnown RBP12.27□□□□□ -0.45
SSBP3-206ENST00000420121 BSNDQ8WZ55 320 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 PGBD4Q96DM1 585 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 IGSF21Q96ID5 467 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 RSAD1Q9HA92 442 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.45
SSBP3-206ENST00000420121 IPPQ9Y573 584 aa12.27□□□□□ -0.45
SSBP3-206ENST00000420121 ZNF318Q5VUA4 2279 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 INO80B-WBP1J3KQ70 363 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 AXLP30530 894 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 ALDH7A1P49419 539 aaKnown RBP12.26□□□□□ -0.45
SSBP3-206ENST00000420121 TFDP1Q14186 410 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 SMC1AQ14683 1233 aaKnown RBP12.26□□□□□ -0.45
SSBP3-206ENST00000420121 IL17AQ16552 155 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 TMEM31Q5JXX7 168 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 CDCA2Q69YH5 1023 aaPredicted RBP12.26□□□□□ -0.45
SSBP3-206ENST00000420121 ANKRD54Q6NXT1 300 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 DDX53Q86TM3 631 aaKnown RBP12.26□□□□□ -0.45
SSBP3-206ENST00000420121 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 FAM184AQ8NB25 1140 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 AUTS2Q8WXX7 1259 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 CCDC51Q96ER9 411 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 TMEM169Q96HH4 297 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 CSRNP2Q9H175 543 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 MIOSQ9NXC5 875 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 CDH22Q9UJ99 828 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 HES2Q9Y543 173 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 PCDHB6Q9Y5E3 794 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 IRAK3Q9Y616 596 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 MYH11P35749 1972 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms