RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PDILTQ8N807 584 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 HPSEQ9Y251 543 aa20.59■□□□□ 0.89
PTCD3-204ENST00000418628 FRMD3A2A2Y4 597 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 LINC01553A4QN01 128 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 TTLL13PA6NNM8 815 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 B4GALT5O43286 388 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 CMA1P23946 247 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 RAB27AP51159 221 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 NCKAP1LP55160 1127 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 NOTUMQ6P988 496 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 Q7L0L9 218 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 SPRED2Q7Z698 418 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 CMTR2Q8IYT2 770 aaKnown RBP20.58■□□□□ 0.89
PTCD3-204ENST00000418628 TMEM161BQ8NDZ6 487 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 DEPTORQ8TB45 409 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 ZBED2Q9BTP6 218 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 TNMDQ9H2S6 317 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 ZNF576Q9H609 170 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 TMEM134Q9H6X4 195 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 TSHZ2Q9NRE2 1034 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 FAM105AQ9NUU6 356 aa20.58■□□□□ 0.89
PTCD3-204ENST00000418628 RNF216Q9NWF9 866 aaPredicted RBP20.58■□□□□ 0.89
PTCD3-204ENST00000418628 A0A1B0GUA9 196 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 A0A1W2PQ27 194 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 A0A1W2PQ64 194 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 A0A1W2PQD8 194 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 ACKR2O00590 384 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 EOMESO95936 686 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 PRKCBP05771 671 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 DHX8Q14562 1220 aaKnown RBP20.57■□□□□ 0.88
PTCD3-204ENST00000418628 MAPK6Q16659 721 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 PPP2R2DQ66LE6 453 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 TWF2Q6IBS0 349 aaKnown RBP20.57■□□□□ 0.88
PTCD3-204ENST00000418628 CNNM4Q6P4Q7 775 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 SV2BQ7L1I2 683 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 MRPL10Q7Z7H8 261 aaKnown RBP20.57■□□□□ 0.88
PTCD3-204ENST00000418628 YME1L1Q96TA2 773 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 PANK2Q9BZ23 570 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 SEMA6BQ9H3T3 888 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 SLC28A3Q9HAS3 691 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 MAGEF1Q9HAY2 307 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 GDPD2Q9HCC8 539 aa20.57■□□□□ 0.88
PTCD3-204ENST00000418628 LARSQ9P2J5 1176 aaKnown RBP20.57■□□□□ 0.88
PTCD3-204ENST00000418628 BRWD1Q9NSI6 2320 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 SFI1A8K8P3 1242 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 GATMP50440 423 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 CLLU1OSQ5K130 101 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 IQUBQ8NA54 791 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 DDX12PQ92771 950 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 CLP1Q92989 425 aaKnown RBP20.56■□□□□ 0.88
PTCD3-204ENST00000418628 CPB2Q96IY4 423 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 GUCD1Q96NT3 240 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 PARVGQ9HBI0 331 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 KMT5AQ9NQR1 393 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 MTMR10Q9NXD2 777 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 FAM13BQ9NYF5 915 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 KCNG1Q9UIX4 513 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 RBM19Q9Y4C8 960 aaKnown RBP20.56■□□□□ 0.88
PTCD3-204ENST00000418628 PCDHB7Q9Y5E2 793 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 ZMYM2Q9UBW7 1377 aa20.56■□□□□ 0.88
PTCD3-204ENST00000418628 SLC16A4O15374 487 aa20.55■□□□□ 0.88
PTCD3-204ENST00000418628 POLR2DO15514 142 aaKnown RBP20.55■□□□□ 0.88
PTCD3-204ENST00000418628 ACTN4O43707 911 aaKnown RBP20.55■□□□□ 0.88
PTCD3-204ENST00000418628 MAPTP10636 758 aaKnown RBP20.55■□□□□ 0.88
PTCD3-204ENST00000418628 SKIP12755 728 aa20.55■□□□□ 0.88
PTCD3-204ENST00000418628 PFKFB1P16118 471 aa20.55■□□□□ 0.88
PTCD3-204ENST00000418628 ERVK-21P61565 698 aa20.55■□□□□ 0.88
PTCD3-204ENST00000418628 DEFB123Q8N688 67 aa20.55■□□□□ 0.88
PTCD3-204ENST00000418628 SMG8Q8ND04 991 aaKnown RBP20.55■□□□□ 0.88
PTCD3-204ENST00000418628 DHX58Q96C10 678 aa20.55■□□□□ 0.88
PTCD3-204ENST00000418628 PYM1Q9BRP8 204 aaKnown RBP20.55■□□□□ 0.88
PTCD3-204ENST00000418628 EIF2AQ9BY44 585 aaKnown RBP20.55■□□□□ 0.88
PTCD3-204ENST00000418628 PDZD7Q9H5P4 517 aa20.55■□□□□ 0.88
PTCD3-204ENST00000418628 CHMP5Q9NZZ3 219 aa20.55■□□□□ 0.88
PTCD3-204ENST00000418628 KCNH3Q9ULD8 1083 aa20.55■□□□□ 0.88
PTCD3-204ENST00000418628 PCDHB2Q9Y5E7 798 aa20.55■□□□□ 0.88
PTCD3-204ENST00000418628 REV3LO60673 3130 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 CCDC169A6NNP5 214 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 MEIS3P2A8K0S8 358 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 ABLIM1O14639 778 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 INPPL1O15357 1258 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 HOXA2O43364 376 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 FAM13AO94988 1023 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 FGFR1P11362 822 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 SCP2P22307 547 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 NT5DC1Q5TFE4 455 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 SLC27A1Q6PCB7 646 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 RSPH1Q8WYR4 309 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 CASD1Q96PB1 797 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 TRIM9Q9C026 710 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 TMEM117Q9H0C3 514 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 ST6GALNAC4Q9H4F1 302 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 LRFN2Q9ULH4 789 aa20.54■□□□□ 0.88
PTCD3-204ENST00000418628 EPOPA6NHQ4 379 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 TBCAO75347 108 aaKnown RBP20.53■□□□□ 0.88
PTCD3-204ENST00000418628 PPP1R37O75864 691 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 PROZP22891 400 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 SMTNP53814 917 aa20.53■□□□□ 0.88
PTCD3-204ENST00000418628 PRPF4BQ13523 1007 aaKnown RBP20.53■□□□□ 0.88
PTCD3-204ENST00000418628 GRIN2CQ14957 1233 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms