RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 HSPBP1Q9NZL4 362 aa14.15□□□□□ -0.14
BDNF-208ENST00000418212 HACL1Q9UJ83 578 aa14.15□□□□□ -0.14
BDNF-208ENST00000418212 ARHGAP42A6NI28 874 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 DYNC1LI2O43237 492 aaPredicted RBP14.14□□□□□ -0.15
BDNF-208ENST00000418212 CPP00450 1065 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 CLNS1AP54105 237 aaKnown RBP14.14□□□□□ -0.15
BDNF-208ENST00000418212 APBA1Q02410 837 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 RPS6KA2Q15349 733 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 RAPH1Q70E73 1250 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 SPATA4Q8NEY3 305 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 TUFT1Q9NNX1 390 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 GINM1Q9NU53 330 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 PPP1R3GB7ZBB8 358 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 DGAT1O75907 488 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 GSTA1P08263 222 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 GSTA2P09210 222 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 VEGFAP15692 232 aaPredicted RBP14.14□□□□□ -0.15
BDNF-208ENST00000418212 NR1D1P20393 614 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 HOXA7P31268 230 aaPredicted RBP14.14□□□□□ -0.15
BDNF-208ENST00000418212 PSMC1P62191 440 aaKnown RBP14.14□□□□□ -0.15
BDNF-208ENST00000418212 CXCL9Q07325 125 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 GRIK5Q16478 980 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 XKR3Q5GH77 459 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 FRMD5Q7Z6J6 570 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 GPRC5CQ9NQ84 441 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 IL17RBQ9NRM6 502 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 SCINQ9Y6U3 715 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 BCL9O00512 1426 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 UBE4BO95155 1302 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 EVI5O60447 810 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 GBP1P32455 592 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 SOX5P35711 763 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 PKN1Q16512 942 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 DUOXA2Q1HG44 320 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 EMBQ6PCB8 327 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 GPD1LQ8N335 351 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 RNF10Q8N5U6 811 aaKnown RBP14.14□□□□□ -0.15
BDNF-208ENST00000418212 PYROXD1Q8WU10 500 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 CCDC68Q9H2F9 335 aa14.14□□□□□ -0.15
BDNF-208ENST00000418212 MSH4O15457 936 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 CIITAP33076 1130 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 MSH2P43246 934 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 GPC3P51654 580 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 VSNL1P62760 191 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 TADA2BQ86TJ2 420 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 CYP2W1Q8TAV3 490 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 C1orf54Q8WWF1 131 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 MIF4GDA9UHW6 222 aaKnown RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 PI4K2BG5E9Z4 385 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 GMNNO75496 209 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 GALCP54803 685 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 STYK1Q6J9G0 422 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 RWDD4Q6NW29 188 aaKnown RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 PCGF5Q86SE9 256 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 WHAMMQ8TF30 809 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 RNF139Q8WU17 664 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 SKA2Q8WVK7 121 aaPredicted RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 ADAM33Q9BZ11 813 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 RIMS1Q86UR5 1692 aaKnown RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 TNS2Q63HR2 1409 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 FRMD3A2A2Y4 597 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 M0QYV0 167 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 TXNDC9O14530 226 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 LPXNO60711 386 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 HUS1O60921 280 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 PLEKP08567 350 aaPredicted RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 FMO5P49326 533 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 TPD52P55327 224 aaPredicted RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 GJB7Q6PEY0 223 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 SEPT1Q8WYJ6 367 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 ZDHHC15Q96MV8 337 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 MAP3K14Q99558 947 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 MXRA8Q9BRK3 442 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 PI4K2AQ9BTU6 479 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 TARS2Q9BW92 718 aaKnown RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 AGXT2Q9BYV1 514 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 PLAAQ9Y263 795 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 KDM4FA0A1W2PPD8 638 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 RARBP10826 455 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 PRKCEQ02156 737 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 SNRNP35Q16560 246 aaKnown RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 SEZ6Q53EL9 994 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 RBM46Q8TBY0 533 aaKnown RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 DDX4Q9NQI0 724 aaKnown RBP14.13□□□□□ -0.15
BDNF-208ENST00000418212 KLHL11Q9NVR0 708 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 ZNF446Q9NWS9 450 aa14.13□□□□□ -0.15
BDNF-208ENST00000418212 ESYT2A0FGR8 921 aa14.12□□□□□ -0.15
BDNF-208ENST00000418212 MED24O75448 989 aa14.12□□□□□ -0.15
BDNF-208ENST00000418212 H2AFXP16104 143 aaPredicted RBP14.12□□□□□ -0.15
BDNF-208ENST00000418212 MTM1Q13496 603 aa14.12□□□□□ -0.15
BDNF-208ENST00000418212 RCN2Q14257 317 aa14.12□□□□□ -0.15
BDNF-208ENST00000418212 MYLK4Q86YV6 388 aaPredicted RBP14.12□□□□□ -0.15
BDNF-208ENST00000418212 TRIM59Q8IWR1 403 aa14.12□□□□□ -0.15
BDNF-208ENST00000418212 KIF12Q96FN5 646 aa14.12□□□□□ -0.15
BDNF-208ENST00000418212 SAYSD1Q9NPB0 183 aa14.12□□□□□ -0.15
BDNF-208ENST00000418212 SUFUQ9UMX1 484 aa14.12□□□□□ -0.15
BDNF-208ENST00000418212 G3BP2Q9UN86 482 aaKnown RBP14.12□□□□□ -0.15
BDNF-208ENST00000418212 A0A1B0GUA9 196 aa14.12□□□□□ -0.15
BDNF-208ENST00000418212 TNPO2O14787 897 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms