RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 OCEL1Q9H607 264 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 VCX3AQ9NNX9 186 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 STARD13Q9Y3M8 1113 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 IRS4O14654 1257 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 MAPK13O15264 365 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 HSPA6P17066 643 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 STRN3Q13033 797 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 COASYQ13057 564 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 ZNF211Q13398 564 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 GIT2Q14161 759 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 NONOQ15233 471 aaKnown RBP eCLIP8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 FAM47AQ5JRC9 791 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 SPDYAQ5MJ70 313 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 CCNJLQ8IV13 435 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 ZC3H3Q8IXZ2 948 aaKnown RBP8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 ARHGAP18Q8N392 663 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 SLC35G2Q8TBE7 412 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 CDK5RAP3Q96JB5 506 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 TAOK3Q9H2K8 898 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 SLC4A7Q9Y6M7 1214 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 BRWD3Q6RI45 1802 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 COL1A1P02452 1464 aaPredicted RBP8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 DCTN3O75935 186 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 ALAS1P13196 640 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 PLCG2P16885 1265 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 BCAMP50895 628 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 NEK8Q86SG6 692 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 PRELID2Q8N945 189 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 SCG3Q8WXD2 468 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 CDC42EP4Q9H3Q1 356 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 DNAAF2Q9NVR5 837 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 TMCO1Q9UM00 188 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 TAF1P21675 1872 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 BTAF1O14981 1849 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 SYNGAP1Q96PV0 1343 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 COL24A1Q17RW2 1714 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 TTLL1O95922 423 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 MARK3P27448 753 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 FOXN2P32314 431 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 ORC2Q13416 577 aaPredicted RBP8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 KHDC1Q4VXA5 237 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 FAM26FQ5R3K3 315 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 ZC3H18Q86VM9 953 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 LCA5Q86VQ0 697 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 U2AF1L4Q8WU68 220 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 ALG3Q92685 438 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 DNAJC19Q96DA6 116 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 PCDHGA4Q9Y5G9 962 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 ADGRA3Q8IWK6 1321 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 USP17L12C9JPN9 530 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 USP17L21D6R901 530 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 CTNNA2P26232 953 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 PON1P27169 355 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 TXKP42681 527 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 JAM2P57087 298 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 SESN3P58005 492 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 MOGSQ13724 837 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 KPNB1Q14974 876 aaKnown RBP8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 CCDC6Q16204 474 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 GSTA3Q16772 222 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 TTC27Q6P3X3 843 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 C4orf50Q6ZRC1 276 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 CYFIP1Q7L576 1253 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 C7orf43Q8WVR3 580 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 NRG4Q8WWG1 115 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 SLC4A9Q96Q91 983 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 NT5C3AQ9H0P0 336 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 NKIRAS1Q9NYS0 192 aa8.61□□□□□ -1.03
HMGXB4-202ENST00000418170 NHSQ6T4R5 1651 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 PDE8AO60658 829 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 GFPT2O94808 682 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 TMEM253P0C7T8 217 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 FXR2P51116 673 aaKnown RBP eCLIP8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 SLC35G1Q2M3R5 365 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 CNPY1Q3B7I2 92 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 PPP1R21Q6ZMI0 780 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 FAM47EQ6ZV65 393 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 FOXO6A8MYZ6 492 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 MAGEB2O15479 319 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 ACSL3O95573 720 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 PTPN4P29074 926 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 EVX2Q03828 476 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 MCL1Q07820 350 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 RCN1Q15293 331 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 ZRSR2Q15696 482 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 EXOC3L4Q17RC7 722 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 ZNF449Q6P9G9 518 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 CCDC137Q6PK04 289 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 LRRC74BQ6ZQY2 392 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 KCNK18Q7Z418 384 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 CCDC25Q86WR0 208 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 ZNF513Q8N8E2 541 aaPredicted RBP8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 SLC30A5Q8TAD4 765 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 OLIG1Q8TAK6 271 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 MTMR9Q96QG7 549 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 HAPLN3Q96S86 360 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 CCDC28BQ9BUN5 200 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 FGFBP2Q9BYJ0 223 aa8.6□□□□□ -1.03
HMGXB4-202ENST00000418170 KCTD10Q9H3F6 313 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms