RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 GJB1P08034 283 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 C6orf222P0C671 652 aaPredicted RBP22.7■■□□□ 1.22
CASC3-203ENST00000418132 SMIM10L2AP0DMW4 78 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 SMIM10L2BP0DMW5 78 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 CASP14P31944 242 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 PURAQ00577 322 aaKnown RBP22.7■■□□□ 1.22
CASC3-203ENST00000418132 MAP3K21Q5TCX8 1036 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 ZBTB8OSQ8IWT0 167 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 PXYLP1Q8TE99 480 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 ZNF296Q8WUU4 475 aaPredicted RBP22.7■■□□□ 1.22
CASC3-203ENST00000418132 LMBR1Q8WVP7 490 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 KATNAL1Q9BW62 490 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 NFKBIZQ9BYH8 718 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 SETD4Q9NVD3 440 aa22.7■■□□□ 1.22
CASC3-203ENST00000418132 MYADML2A6NDP7 307 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 AFPP02771 609 aaKnown RBP22.69■■□□□ 1.22
CASC3-203ENST00000418132 RARBP10826 455 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 LIG4P49917 911 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 FXR1P51114 621 aaKnown RBP eCLIP22.69■■□□□ 1.22
CASC3-203ENST00000418132 ADKP55263 362 aaKnown RBP22.69■■□□□ 1.22
CASC3-203ENST00000418132 GOLGA8FQ08AF8 430 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 GOLGA8DPQ0D2H9 430 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 FIGNQ5HY92 759 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 FBXL18Q96ME1 805 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 NUP58Q9BVL2 599 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 TTYH3Q9C0H2 523 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 SPTLC3Q9NUV7 552 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 MSCO60682 206 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 MFAP3LO75121 409 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 TPM1P09493 284 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 CCND3P30281 292 aaPredicted RBP22.69■■□□□ 1.22
CASC3-203ENST00000418132 KLK7P49862 253 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 MCCD1P59942 119 aaPredicted RBP22.69■■□□□ 1.22
CASC3-203ENST00000418132 PTENP60484 403 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 ARHGEF6Q15052 776 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 DCAF17Q5H9S7 520 aaPredicted RBP22.69■■□□□ 1.22
CASC3-203ENST00000418132 INTS8Q75QN2 995 aaKnown RBP22.69■■□□□ 1.22
CASC3-203ENST00000418132 CNGA4Q8IV77 575 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 CCDC155Q8N6L0 562 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 RAET1EQ8TD07 263 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 CPLX3Q8WVH0 158 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 POMGNT1Q8WZA1 660 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 NLRP4Q96MN2 994 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 TMX1Q9H3N1 280 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 SPC25Q9HBM1 224 aa22.69■■□□□ 1.22
CASC3-203ENST00000418132 MBLAC1A4D2B0 266 aaPredicted RBP22.68■■□□□ 1.22
CASC3-203ENST00000418132 EDN1P05305 212 aa22.68■■□□□ 1.22
CASC3-203ENST00000418132 KCNMA1Q12791 1236 aa22.68■■□□□ 1.22
CASC3-203ENST00000418132 BFSP1Q12934 665 aa22.68■■□□□ 1.22
CASC3-203ENST00000418132 TCERG1LQ5VWI1 586 aa22.68■■□□□ 1.22
CASC3-203ENST00000418132 ZPBP2Q6X784 338 aa22.68■■□□□ 1.22
CASC3-203ENST00000418132 RDH13Q8NBN7 331 aa22.68■■□□□ 1.22
CASC3-203ENST00000418132 ZSWIM2Q8NEG5 633 aa22.68■■□□□ 1.22
CASC3-203ENST00000418132 IQCDQ96DY2 449 aa22.68■■□□□ 1.22
CASC3-203ENST00000418132 SKILP12757 684 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 ADAM17P78536 824 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 GNASQ5JWF2 1037 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 NFRKBQ6P4R8 1299 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 IFNLR1Q8IU57 520 aaPredicted RBP22.67■■□□□ 1.22
CASC3-203ENST00000418132 PANX2Q96RD6 677 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 TARS2Q9BW92 718 aaKnown RBP22.67■■□□□ 1.22
CASC3-203ENST00000418132 CAPN11Q9UMQ6 739 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 AKT3Q9Y243 479 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 TTC26A0AVF1 554 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 RNF225M0QZC1 329 aaPredicted RBP22.67■■□□□ 1.22
CASC3-203ENST00000418132 KIAA0391O15091 583 aaKnown RBP22.67■■□□□ 1.22
CASC3-203ENST00000418132 ADAMTS4O75173 837 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 PGK1P00558 417 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 PRMT2P55345 433 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 MAPK6Q16659 721 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 SLFN12LQ6IEE8 588 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 KIAA0319LQ8IZA0 1049 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 CCDC112Q8NEF3 446 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 CCDC51Q96ER9 411 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 PCMTD1Q96MG8 357 aaPredicted RBP22.67■■□□□ 1.22
CASC3-203ENST00000418132 FZD8Q9H461 694 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 IFT122Q9HBG6 1241 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 USP20Q9Y2K6 914 aa22.67■■□□□ 1.22
CASC3-203ENST00000418132 R3HCC1Q9Y3T6 440 aaKnown RBP22.67■■□□□ 1.22
CASC3-203ENST00000418132 PRKCBP05771 671 aa22.66■■□□□ 1.22
CASC3-203ENST00000418132 KRT13P13646 458 aa22.66■■□□□ 1.22
CASC3-203ENST00000418132 TRIM21P19474 475 aaKnown RBP22.66■■□□□ 1.22
CASC3-203ENST00000418132 CHMP4BP1P59074 171 aa22.66■■□□□ 1.22
CASC3-203ENST00000418132 SNRNP35Q16560 246 aaKnown RBP22.66■■□□□ 1.22
CASC3-203ENST00000418132 SAAL1Q96ER3 474 aa22.66■■□□□ 1.22
CASC3-203ENST00000418132 MAP7D2Q96T17 732 aa22.66■■□□□ 1.22
CASC3-203ENST00000418132 MRPL4Q9BYD3 311 aaKnown RBP22.66■■□□□ 1.22
CASC3-203ENST00000418132 XPNPEP3Q9NQH7 507 aa22.66■■□□□ 1.22
CASC3-203ENST00000418132 GOLGA8IPA6NC78 632 aa22.65■■□□□ 1.22
CASC3-203ENST00000418132 GOLGA8JA6NMD2 632 aa22.65■■□□□ 1.22
CASC3-203ENST00000418132 HOXC8P31273 242 aa22.65■■□□□ 1.22
CASC3-203ENST00000418132 PHKA2P46019 1235 aa22.65■■□□□ 1.22
CASC3-203ENST00000418132 CBWD2Q8IUF1 395 aa22.65■■□□□ 1.22
CASC3-203ENST00000418132 TMEM139Q8IV31 216 aa22.65■■□□□ 1.22
CASC3-203ENST00000418132 GPD1LQ8N335 351 aa22.65■■□□□ 1.22
CASC3-203ENST00000418132 MTG1Q9BT17 334 aaPredicted RBP22.65■■□□□ 1.22
CASC3-203ENST00000418132 MMRN2Q9H8L6 949 aa22.65■■□□□ 1.22
CASC3-203ENST00000418132 A0A1W2PQJ5 194 aa22.65■■□□□ 1.22
CASC3-203ENST00000418132 GTPBP10A4D1E9 387 aaKnown RBP22.65■■□□□ 1.22
CASC3-203ENST00000418132 NRDCO43847 1150 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms