RNA–Protein interactions for RNA: ENST00000417903.5

NDUFA3-205, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-205ENST00000417903 KLHL23Q8NBE8 558 aa16.75■□□□□ 0.27
NDUFA3-205ENST00000417903 CPB2Q96IY4 423 aa16.75■□□□□ 0.27
NDUFA3-205ENST00000417903 CWH43Q9H720 699 aa16.75■□□□□ 0.27
NDUFA3-205ENST00000417903 CCDC39Q9UFE4 941 aa16.75■□□□□ 0.27
NDUFA3-205ENST00000417903 RBM19Q9Y4C8 960 aaKnown RBP16.75■□□□□ 0.27
NDUFA3-205ENST00000417903 CNTNAP2Q9UHC6 1331 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 CARNS1A5YM72 827 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 ACKR2O00590 384 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 GRM6O15303 877 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 B4GALT5O43286 388 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 OFD1O75665 1012 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 ITGA4P13612 1032 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 PRPF4BQ13523 1007 aaKnown RBP16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 KARSQ15046 597 aaKnown RBP16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 STK38Q15208 465 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 NOMO2Q5JPE7 1267 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 FOXD4L5Q5VV16 416 aaPredicted RBP16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 ATL3Q6DD88 541 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 SLC27A1Q6PCB7 646 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 LRRC55Q6ZSA7 311 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 HACE1Q8IYU2 909 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 COLGALT1Q8NBJ5 622 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 FOXD4L4Q8WXT5 416 aaPredicted RBP16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 LPPQ93052 612 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 EPSTI1Q96J88 318 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 TRIM6Q9C030 488 aaPredicted RBP16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 CDH23Q9H251 3354 aa16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 PRRC2BQ5JSZ5 2229 aaKnown RBP16.74■□□□□ 0.27
NDUFA3-205ENST00000417903 PHLPP2Q6ZVD8 1323 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 CCDC169A6NNP5 214 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 K7ERI5 159 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 F13A1P00488 732 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 ITGB1P05556 798 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 PRKCBP05771 671 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 PLCG1P19174 1290 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 DDIT3P35638 169 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 TXLNAP40222 546 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 NPTX2P47972 431 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 PEX3P56589 373 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 UBE3AQ05086 875 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 DMP1Q13316 513 aaPredicted RBP16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 BECN1Q14457 450 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 SKIV2LQ15477 1246 aaKnown RBP16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 LONRF3Q496Y0 759 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 TIGD5Q53EQ6 642 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 AGMOQ6ZNB7 445 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 DAW1Q8N136 415 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 LINC00301Q8NCQ3 95 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 SMG8Q8ND04 991 aaKnown RBP16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 SPPL3Q8TCT6 385 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 ZNF558Q96NG5 402 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 CLIC6Q96NY7 704 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 NTPCRQ9BSD7 190 aaKnown RBP16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 EIF2AQ9BY44 585 aaKnown RBP16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 CCDC113Q9H0I3 377 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 ALG13Q9NP73 1137 aaKnown RBP16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 KANSL3Q9P2N6 904 aa16.73■□□□□ 0.27
NDUFA3-205ENST00000417903 N4BP3O15049 544 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 SPTLC2O15270 562 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 YEATS4O95619 227 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 PPM1AP35813 382 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 ALDH7A1P49419 539 aaKnown RBP16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 SMTNP53814 917 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 RNASELQ05823 741 aaKnown RBP16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 MAPK7Q13164 816 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 TMEM132AQ24JP5 1023 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 ARSHQ5FYA8 562 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 SPECC1Q5M775 1068 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 KCNT2Q6UVM3 1135 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 THNSL1Q8IYQ7 743 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 URGCPQ8TCY9 931 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 SPIRE2Q8WWL2 714 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 RAD54LQ92698 747 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 SYMPKQ92797 1274 aaKnown RBP16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 TMEM134Q9H6X4 195 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 RSAD1Q9HA92 442 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 KMT5AQ9NQR1 393 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 BLOC1S4Q9NUP1 217 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 PUF60Q9UHX1 559 aaKnown RBP16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 COG5Q9UP83 839 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 IPPQ9Y573 584 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 ARID2Q68CP9 1835 aa16.72■□□□□ 0.27
NDUFA3-205ENST00000417903 MEIS3P2A8K0S8 358 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 SFI1A8K8P3 1242 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 PPP6R2O75170 966 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 FGF18O76093 207 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 PLS3P13797 630 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 LIG1P18858 919 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 PLCB3Q01970 1234 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 KRT17Q04695 432 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 RAD51AP2Q09MP3 1159 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 DHX8Q14562 1220 aaKnown RBP16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 RRAGBQ5VZM2 374 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 USP49Q70CQ1 688 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 APBB1IPQ7Z5R6 666 aaPredicted RBP16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 GPBP1Q86WP2 473 aa16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 ATXN2LQ8WWM7 1075 aaKnown RBP16.71■□□□□ 0.27
NDUFA3-205ENST00000417903 KIFC3Q9BVG8 833 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms