RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NMRK2Q9NPI5 230 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.28■□□□□ 0.52
SSBP3-205ENST00000417664 USP20Q9Y2K6 914 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 FHOD1Q9Y613 1164 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 STYXL1Q9Y6J8 313 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 MCM3APO60318 1980 aa18.28■□□□□ 0.52
SSBP3-205ENST00000417664 IGKV6-21A0A0C4DH24 114 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 K7ERI5 159 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 URI1O94763 535 aaPredicted RBP18.27■□□□□ 0.52
SSBP3-205ENST00000417664 PLEKP08567 350 aaPredicted RBP18.27■□□□□ 0.52
SSBP3-205ENST00000417664 CCDC172P0C7W6 258 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 TRIM49P0CI25 452 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 TRIM49CP0CI26 452 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 EFNA5P52803 228 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 INHBEP58166 350 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 CBWD6Q4V339 395 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 CBWD3Q5JTY5 395 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 CBWD5Q5RIA9 395 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 TAS1R3Q7RTX0 852 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 ASAP3Q8TDY4 903 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 BICD1Q96G01 975 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 ERO1AQ96HE7 468 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 MFSD14AQ96MC6 490 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 STK33Q9BYT3 514 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 APEX2Q9UBZ4 518 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 PCDHA13Q9Y5I0 950 aa18.27■□□□□ 0.52
SSBP3-205ENST00000417664 ZNF236Q9UL36 1845 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 CTAGE9A4FU28 777 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 DCAF8L1A6NGE4 600 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 FANCGO15287 622 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 LIG4P49917 911 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 ARHGAP1Q07960 439 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 PLCB4Q15147 1175 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 C10orf76Q5T2E6 689 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 SLC39A4Q6P5W5 647 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 GPD1LQ8N335 351 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 PPTC7Q8NI37 304 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 INTS2Q9H0H0 1204 aaKnown RBP18.26■□□□□ 0.51
SSBP3-205ENST00000417664 PDGFCQ9NRA1 345 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 ERAP1Q9NZ08 941 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 GUCA1BQ9UMX6 200 aa18.26■□□□□ 0.51
SSBP3-205ENST00000417664 A0A0U1RQJ8 604 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 LRRIQ4A6NIV6 560 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 ZNF263O14978 683 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 PJA2O43164 708 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 ADCY3O60266 1144 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 GFPT2O94808 682 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 LDHAP00338 332 aaKnown RBP18.25■□□□□ 0.51
SSBP3-205ENST00000417664 FERP16591 822 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 STAT1P42224 750 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 ZNF157P51786 506 aaPredicted RBP18.25■□□□□ 0.51
SSBP3-205ENST00000417664 SLC18A3Q16572 532 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 IRF2BP2Q7Z5L9 587 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 RASAL3Q86YV0 1011 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 PARD3BQ8TEW8 1205 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 ATRIPQ8WXE1 791 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 PSPC1Q8WXF1 523 aaKnown RBP18.25■□□□□ 0.51
SSBP3-205ENST00000417664 MAML3Q96JK9 1138 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 IRX2Q9BZI1 471 aaPredicted RBP18.25■□□□□ 0.51
SSBP3-205ENST00000417664 KATNBL1Q9H079 304 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 ABHD16BQ9H3Z7 469 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 EXTL3O43909 919 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 ATP8B3O60423 1300 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 MXI1P50539 228 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 CYP27A1Q02318 531 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 APBA1Q02410 837 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 IQCEQ6IPM2 695 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 VPS36Q86VN1 386 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 LMO3Q8TAP4 145 aa18.25■□□□□ 0.51
SSBP3-205ENST00000417664 NAPGQ99747 312 aaPredicted RBP18.25■□□□□ 0.51
SSBP3-205ENST00000417664 ADGRA2Q96PE1 1338 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 ZNF233A6NK53 670 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 ZBTB42B2RXF5 422 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 SNAI1O95863 264 aaPredicted RBP18.24■□□□□ 0.51
SSBP3-205ENST00000417664 ADRB2P07550 413 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 MAGEA1P43355 309 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 CYP24A1Q07973 514 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 PPP3CAQ08209 521 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 EPC2Q52LR7 807 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 ZNF484Q5JVG2 852 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 C1orf220Q5T0J3 134 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 ZPBP2Q6X784 338 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 CBWD2Q8IUF1 395 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 SLC35F6Q8N357 371 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 COPS5Q92905 334 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 TINF2Q9BSI4 451 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 C2orf40Q9H1Z8 148 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 TMEM8AQ9HCN3 771 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 COQ4Q9Y3A0 265 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 MRFAP1Q9Y605 127 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 SIP14410 1827 aa18.24■□□□□ 0.51
SSBP3-205ENST00000417664 ASAP2O43150 1006 aa18.23■□□□□ 0.51
SSBP3-205ENST00000417664 PPFIA4O75335 1185 aa18.23■□□□□ 0.51
SSBP3-205ENST00000417664 MARK3P27448 753 aa18.23■□□□□ 0.51
SSBP3-205ENST00000417664 DLG4P78352 724 aa18.23■□□□□ 0.51
SSBP3-205ENST00000417664 CAPSQ13938 189 aa18.23■□□□□ 0.51
SSBP3-205ENST00000417664 CDCA2Q69YH5 1023 aaPredicted RBP18.23■□□□□ 0.51
SSBP3-205ENST00000417664 KRT39Q6A163 491 aa18.23■□□□□ 0.51
SSBP3-205ENST00000417664 IQSEC1Q6DN90 963 aa18.23■□□□□ 0.51
SSBP3-205ENST00000417664 TRIM50Q86XT4 487 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms