RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 FBXO18Q8NFZ0 1043 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 VN1R2Q8NFZ6 395 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 CASP10Q92851 521 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 IGSF21Q96ID5 467 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 NFKBIZQ9BYH8 718 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 TUFT1Q9NNX1 390 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 IRAK3Q9Y616 596 aa20.5■□□□□ 0.87
VPS16-204ENST00000417508 LOC730098B7Z3J9 87 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 NT5C1B-RDH14C9J2C7 533 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 WNT7AO00755 349 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 CXCL14O95715 111 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 NCLP19338 710 aaKnown RBP20.49■□□□□ 0.87
VPS16-204ENST00000417508 MCM7P33993 719 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 TECP42680 631 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 RBM25P49756 843 aaKnown RBP20.49■□□□□ 0.87
VPS16-204ENST00000417508 RARRES1P49788 294 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 HERC4Q5GLZ8 1057 aaPredicted RBP20.49■□□□□ 0.87
VPS16-204ENST00000417508 UBXN11Q5T124 520 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 RNF135Q8IUD6 432 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 SUSD6Q92537 303 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 POLR3CQ9BUI4 534 aaPredicted RBP20.49■□□□□ 0.87
VPS16-204ENST00000417508 TMEM60Q9H2L4 133 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 RSAD1Q9HA92 442 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 BMP2KQ9NSY1 1161 aaPredicted RBP20.49■□□□□ 0.87
VPS16-204ENST00000417508 INPP5FQ9Y2H2 1132 aa20.49■□□□□ 0.87
VPS16-204ENST00000417508 MEIS3P2A8K0S8 358 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 ALDH2P05091 517 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 ATP2B1P20020 1258 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 TRAPPC10P48553 1259 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 CBX2Q14781 532 aaPredicted RBP20.48■□□□□ 0.87
VPS16-204ENST00000417508 LONRF3Q496Y0 759 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 TPRNQ4KMQ1 711 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 NOTUMQ6P988 496 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 VPS52Q8N1B4 723 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 FAM184AQ8NB25 1140 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 ERMNQ8TAM6 284 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 FAM193BQ96PV7 902 aaPredicted RBP20.48■□□□□ 0.87
VPS16-204ENST00000417508 NACC1Q96RE7 527 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 TMEM175Q9BSA9 504 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 S1PR5Q9H228 398 aa20.48■□□□□ 0.87
VPS16-204ENST00000417508 DBR1Q9UK59 544 aaKnown RBP20.48■□□□□ 0.87
VPS16-204ENST00000417508 FAM86C2PA6NEL3 165 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 INO80B-WBP1J3KQ70 363 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 SPATA31C1P0DKV0 1188 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 CTSAP10619 480 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 ITGA4P13612 1032 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 MUTP22033 750 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 RBM10P98175 930 aaKnown RBP20.47■□□□□ 0.87
VPS16-204ENST00000417508 GUCY1B3Q02153 619 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 CATSPER3Q86XQ3 398 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 TMEM87AQ8NBN3 555 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 MCPH1Q8NEM0 835 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 PIGOQ8TEQ8 1089 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 ZBP1Q9H171 429 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 CSRNP2Q9H175 543 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 DAXXQ9UER7 740 aaPredicted RBP20.47■□□□□ 0.87
VPS16-204ENST00000417508 RAPGEFL1Q9UHV5 662 aa20.47■□□□□ 0.87
VPS16-204ENST00000417508 POTEMA6NI47 508 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 INPPL1O15357 1258 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 TSPAN1O60635 241 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 CLASP2O75122 1294 aaKnown RBP20.46■□□□□ 0.87
VPS16-204ENST00000417508 RPA1P27694 616 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 GNL2Q13823 731 aaKnown RBP20.46■□□□□ 0.87
VPS16-204ENST00000417508 CAPSQ13938 189 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 SYCE2Q6PIF2 218 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 ZNF280BQ86YH2 543 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 HACE1Q8IYU2 909 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 ASAP3Q8TDY4 903 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 KIF2CQ99661 725 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 FAN1Q9Y2M0 1017 aa20.46■□□□□ 0.87
VPS16-204ENST00000417508 OR52Z1P0C646 297 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 GLRA2P23416 452 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 SLC11A1P49279 550 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 MBTD1Q05BQ5 628 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 ITIH3Q06033 890 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 ZNF174Q15697 407 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 CES5AQ6NT32 575 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 LLGL2Q6P1M3 1020 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 NOSTRINQ8IVI9 506 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 SMG8Q8ND04 991 aaKnown RBP20.45■□□□□ 0.86
VPS16-204ENST00000417508 GBP3Q9H0R5 595 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 DNAJB4Q9UDY4 337 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 NOL7Q9UMY1 257 aaKnown RBP20.45■□□□□ 0.86
VPS16-204ENST00000417508 IPPQ9Y573 584 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 HCFC2Q9Y5Z7 792 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 STK24Q9Y6E0 443 aa20.45■□□□□ 0.86
VPS16-204ENST00000417508 DDHD2O94830 711 aa20.44■□□□□ 0.86
VPS16-204ENST00000417508 C8orf34Q49A92 452 aa20.44■□□□□ 0.86
VPS16-204ENST00000417508 TTC38Q5R3I4 469 aa20.44■□□□□ 0.86
VPS16-204ENST00000417508 PPFIBP1Q86W92 1011 aa20.44■□□□□ 0.86
VPS16-204ENST00000417508 EDAQ92838 391 aa20.44■□□□□ 0.86
VPS16-204ENST00000417508 FAM122AQ96E09 287 aa20.44■□□□□ 0.86
VPS16-204ENST00000417508 NECTIN4Q96NY8 510 aa20.44■□□□□ 0.86
VPS16-204ENST00000417508 POLR3FQ9H1D9 316 aaPredicted RBP20.44■□□□□ 0.86
VPS16-204ENST00000417508 MUTYHQ9UIF7 546 aa20.44■□□□□ 0.86
VPS16-204ENST00000417508 GIT1Q9Y2X7 761 aa20.44■□□□□ 0.86
VPS16-204ENST00000417508 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.43■□□□□ 0.86
VPS16-204ENST00000417508 USO1O60763 962 aaKnown RBP20.43■□□□□ 0.86
VPS16-204ENST00000417508 MED24O75448 989 aa20.43■□□□□ 0.86
VPS16-204ENST00000417508 ARF4P18085 180 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms