RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 POLD4Q9HCU8 107 aa19.88■□□□□ 0.77
SEMA3B-201ENST00000416295 ODF2LQ9ULJ1 636 aa19.88■□□□□ 0.77
SEMA3B-201ENST00000416295 ZDHHC9Q9Y397 364 aa19.88■□□□□ 0.77
SEMA3B-201ENST00000416295 PCDHB2Q9Y5E7 798 aa19.88■□□□□ 0.77
SEMA3B-201ENST00000416295 CNTNAP2Q9UHC6 1331 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 EPOPA6NHQ4 379 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 CCDC169A6NNP5 214 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 ARF4P18085 180 aaPredicted RBP19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 DDIT3P35638 169 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 NPTX2P47972 431 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 RAD51AP2Q09MP3 1159 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 DHX8Q14562 1220 aaKnown RBP19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 MCM6Q14566 821 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 CNNM3Q8NE01 707 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 LRRC15Q8TF66 581 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 CPB2Q96IY4 423 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 CCDC113Q9H0I3 377 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 KMT5AQ9NQR1 393 aa19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 RBM19Q9Y4C8 960 aaKnown RBP19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 MRPL42Q9Y6G3 142 aaKnown RBP19.87■□□□□ 0.77
SEMA3B-201ENST00000416295 B4GALT5O43286 388 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 GTPBP6O43824 516 aaPredicted RBP19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 PRKCBP05771 671 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 KRT18P05783 430 aaKnown RBP19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 RB1P06400 928 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 PLS3P13797 630 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 CTNNB1P35222 781 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 BMPR1AP36894 532 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 ME1P48163 572 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 KRT85P78386 507 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 PRPF4BQ13523 1007 aaKnown RBP19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 ADGRE1Q14246 886 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 TMEM132AQ24JP5 1023 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 ARSHQ5FYA8 562 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 LRRC43Q8N309 656 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 SPIRE2Q8WWL2 714 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 C11orf84Q9BUA3 381 aaPredicted RBP19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 KIFC3Q9BVG8 833 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 PLVAPQ9BX97 442 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 TRIM6Q9C030 488 aaPredicted RBP19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 RNF19AQ9NV58 838 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 CHD7Q9P2D1 2997 aa19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 LARSQ9P2J5 1176 aaKnown RBP19.86■□□□□ 0.77
SEMA3B-201ENST00000416295 A0A1B0GUA9 196 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 C5orf67F2Z3F1 127 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 RFXAPO00287 272 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 ACKR2O00590 384 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 LINC00271P0C7V0 271 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 NCLP19338 710 aaKnown RBP19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 STAT6P42226 847 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 SMTNP53814 917 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 CLLU1OSQ5K130 101 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 UBXN11Q5T124 520 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 SLC27A1Q6PCB7 646 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 GLB1LQ6UWU2 654 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 MRPL10Q7Z7H8 261 aaKnown RBP19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 HACE1Q8IYU2 909 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 CASD1Q96PB1 797 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 REEP2Q9BRK0 252 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 NTPCRQ9BSD7 190 aaKnown RBP19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 MRPL9Q9BYD2 267 aaKnown RBP19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 AAASQ9NRG9 546 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 ARHGAP28Q9P2N2 729 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 RCOR1Q9UKL0 485 aa19.85■□□□□ 0.77
SEMA3B-201ENST00000416295 NPHP3-ACAD11A0A0J9YXS1 232 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 SFI1A8K8P3 1242 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 H3BNC9 293 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 K7ERI5 159 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 N4BP3O15049 544 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 LIG1P18858 919 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 POU3F3P20264 500 aaPredicted RBP19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 NUCB2P80303 420 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 NAALADL2Q58DX5 795 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 SPOUT1Q5T280 376 aaKnown RBP19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 SV2BQ7L1I2 683 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 HELQQ8TDG4 1101 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 GDPD5Q8WTR4 605 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 PPM1EQ8WY54 764 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 LPPQ93052 612 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 EIF2AQ9BY44 585 aaKnown RBP19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 TMEM134Q9H6X4 195 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 IPPQ9Y573 584 aa19.84■□□□□ 0.77
SEMA3B-201ENST00000416295 H0YCG3 227 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 TBCAO75347 108 aaKnown RBP19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 FAM13AO94988 1023 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 SCP2P22307 547 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 TJAP1Q5JTD0 557 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 AXDND1Q5T1B0 1012 aaPredicted RBP19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 SHC4Q6S5L8 630 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 ATXN2LQ8WWM7 1075 aaKnown RBP19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 ADPGKQ9BRR6 497 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 CUEDC2Q9H467 287 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 PARVGQ9HBI0 331 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 UBN1Q9NPG3 1134 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 TYW1Q9NV66 732 aaKnown RBP19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 LMCD1Q9NZU5 365 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 THEGQ9P2T0 379 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 PCDHA7Q9UN72 937 aa19.83■□□□□ 0.77
SEMA3B-201ENST00000416295 RALGAPA2Q2PPJ7 1873 aa19.83■□□□□ 0.76
SEMA3B-201ENST00000416295 SLC16A4O15374 487 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms