RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PTPRSQ13332 1948 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 A0A0U1RQF3 1178 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 A0A1B0GUA9 196 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 SFI1A8K8P3 1242 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 C9IYK1 514 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 K7ERI5 159 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 ENPP3O14638 875 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 EIF3DO15371 548 aaKnown RBP eCLIP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 KLRC4O43908 158 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 NR1I2O75469 434 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 PRKCBP05771 671 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 SKIP12755 728 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 ZSCAN20P17040 1043 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 LIG1P18858 919 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 SARSP49591 514 aaKnown RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 ASIC1P78348 528 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 CACNB1Q02641 598 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 NCBP1Q09161 790 aaKnown RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 COASYQ13057 564 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 PSMD2Q13200 908 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 CUL4BQ13620 913 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 KCNB1Q14721 858 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 SHHQ15465 462 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 LRIT3Q3SXY7 679 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 ZPBP2Q6X784 338 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 OTOP2Q7RTS6 562 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 HAUS6Q7Z4H7 955 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 SFR1Q86XK3 245 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 MAP4K3Q8IVH8 894 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 MYCT1Q8N699 235 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 TOP1MTQ969P6 601 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 ZNF668Q96K58 619 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 RC3H2Q9HBD1 1191 aaKnown RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 PANK4Q9NVE7 773 aa13.12□□□□□ -0.31
ATG4B-207ENST00000415107 CXXC1Q9P0U4 656 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 HOOK1Q9UJC3 728 aaKnown RBP13.12□□□□□ -0.31
ATG4B-207ENST00000415107 DENND3A2RUS2 1198 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 CCDC169A6NNP5 214 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 SLC16A4O15374 487 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 MGEA5O60502 916 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 RHOBTB3O94955 611 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 AMHP03971 560 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 PROZP22891 400 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 KCNJ6P48051 423 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 POSTNQ15063 836 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 BMT2Q1RMZ1 405 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 HERC4Q5GLZ8 1057 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-207ENST00000415107 NT5DC1Q5TFE4 455 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 RTN4RL1Q86UN2 441 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-207ENST00000415107 STAMQ92783 540 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 ADAM2Q99965 735 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 MRPL4Q9BYD3 311 aaKnown RBP13.11□□□□□ -0.31
ATG4B-207ENST00000415107 GTPBP4Q9BZE4 634 aaKnown RBP13.11□□□□□ -0.31
ATG4B-207ENST00000415107 POLD4Q9HCU8 107 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 PTPRHQ9HD43 1115 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 PIN4Q9Y237 131 aaKnown RBP13.11□□□□□ -0.31
ATG4B-207ENST00000415107 TNFSF13BQ9Y275 285 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 SLC4A7Q9Y6M7 1214 aa13.11□□□□□ -0.31
ATG4B-207ENST00000415107 K7ENM7 598 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 N4BP3O15049 544 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 CSDE1O75534 798 aaKnown RBP13.1□□□□□ -0.31
ATG4B-207ENST00000415107 GJB5O95377 273 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 EOMESO95936 686 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 EDN1P05305 212 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 IDEP14735 1019 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 AFMP43652 599 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 STRN3Q13033 797 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 PRPF4BQ13523 1007 aaKnown RBP13.1□□□□□ -0.31
ATG4B-207ENST00000415107 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 FAM26FQ5R3K3 315 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 STXBP4Q6ZWJ1 553 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 EPM2AIP1Q7L775 607 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-207ENST00000415107 ZNF598Q86UK7 904 aaKnown RBP13.1□□□□□ -0.31
ATG4B-207ENST00000415107 NPAS4Q8IUM7 802 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 GSDMAQ96QA5 445 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 ACO2Q99798 780 aaKnown RBP13.1□□□□□ -0.31
ATG4B-207ENST00000415107 FAM105AQ9NUU6 356 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 TMEM161AQ9NX61 479 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 TBX20Q9UMR3 447 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 PCDHB13Q9Y5F0 798 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 LAMA3Q16787 3333 aa13.1□□□□□ -0.31
ATG4B-207ENST00000415107 ABLIM1O14639 778 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 INPPL1O15357 1258 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 HOXA2O43364 376 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 TOM1L1O75674 476 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 RPN1P04843 607 aaKnown RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 STAG3L1P0CL83 205 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 ATP2A2P16615 1042 aaKnown RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 FGFR4P22455 802 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 HTRA4P83105 476 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 SMAD3P84022 425 aaKnown RBP13.09□□□□□ -0.31
ATG4B-207ENST00000415107 DCAF4L1Q3SXM0 396 aa13.09□□□□□ -0.31
ATG4B-207ENST00000415107 UBXN11Q5T124 520 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms