RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 KIFC3Q9BVG8 833 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 TRIM9Q9C026 710 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 TMEM161AQ9NX61 479 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 TRIOBPQ9H2D6 2365 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 A0A1B0GUA9 196 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 GRXCR1A8MXD5 290 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 SLC16A4O15374 487 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 TRAK2O60296 914 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 ZNF623O75123 536 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 EOMESO95936 686 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 PRKCBP05771 671 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 MYL1P05976 194 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 ARF4P18085 180 aaPredicted RBP18.15■□□□□ 0.5
LINC00398-201ENST00000414407 HTRA4P83105 476 aaPredicted RBP18.15■□□□□ 0.5
LINC00398-201ENST00000414407 LONRF3Q496Y0 759 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 TWF2Q6IBS0 349 aaKnown RBP18.15■□□□□ 0.5
LINC00398-201ENST00000414407 GPR153Q6NV75 609 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 ZBED2Q9BTP6 218 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 PBX4Q9BYU1 374 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 GOLPH3LQ9H4A5 285 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 ST6GALNAC4Q9H4F1 302 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 SERTAD1Q9UHV2 236 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 MSRAQ9UJ68 235 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 INSL6Q9Y581 213 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 CNTNAP2Q9UHC6 1331 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 TTC3P53804 2025 aa18.15■□□□□ 0.5
LINC00398-201ENST00000414407 TLL1O43897 1013 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 PRPF4BQ13523 1007 aaKnown RBP18.14■□□□□ 0.49
LINC00398-201ENST00000414407 HAUS6Q7Z4H7 955 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 ECHDC2Q86YB7 292 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 FAM178BQ8IXR5 827 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 CCDC65Q8IXS2 484 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 CNNM3Q8NE01 707 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 STAMQ92783 540 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 FIZ1Q96SL8 496 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 ZHX3Q9H4I2 956 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 OLFML3Q9NRN5 406 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 FAM105AQ9NUU6 356 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 LRFN2Q9ULH4 789 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 PCDHB7Q9Y5E2 793 aa18.14■□□□□ 0.49
LINC00398-201ENST00000414407 TMEM265A0A087WTH1 108 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 SOX1O00570 391 aaPredicted RBP18.13■□□□□ 0.49
LINC00398-201ENST00000414407 B4GALT5O43286 388 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 HOXA2O43364 376 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 DGKIO75912 1065 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 UPP2O95045 317 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 ZNF202O95125 648 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 IDEP14735 1019 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 STRN3Q13033 797 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 UBXN11Q5T124 520 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 SLC27A1Q6PCB7 646 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 TAS1R3Q7RTX0 852 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 ZNF598Q86UK7 904 aaKnown RBP18.13■□□□□ 0.49
LINC00398-201ENST00000414407 FMR1NBQ8N0W7 255 aaPredicted RBP18.13■□□□□ 0.49
LINC00398-201ENST00000414407 RSPH1Q8WYR4 309 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 PAGE5Q96GU1 130 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 CCDC34Q96HJ3 373 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 PANK4Q9NVE7 773 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 LAMA3Q16787 3333 aa18.13■□□□□ 0.49
LINC00398-201ENST00000414407 PVALEFA0A1B0GWK0 134 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 N4BP3O15049 544 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 DNAJB2P25686 324 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 RABGGTBP53611 331 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 GTF2BQ00403 316 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 FAM160A1Q05DH4 1040 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 HERC4Q5GLZ8 1057 aaPredicted RBP18.12■□□□□ 0.49
LINC00398-201ENST00000414407 KANK3Q6NY19 840 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 KRBA2Q6ZNG9 492 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 ZNF720Q7Z2F6 126 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 TMCO2Q7Z6W1 182 aaPredicted RBP18.12■□□□□ 0.49
LINC00398-201ENST00000414407 MRPL10Q7Z7H8 261 aaKnown RBP18.12■□□□□ 0.49
LINC00398-201ENST00000414407 SFR1Q86XK3 245 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 ENGASEQ8NFI3 743 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 SP7Q8TDD2 431 aaPredicted RBP18.12■□□□□ 0.49
LINC00398-201ENST00000414407 ZNF689Q96CS4 500 aaPredicted RBP18.12■□□□□ 0.49
LINC00398-201ENST00000414407 HVCN1Q96D96 273 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 CPB2Q96IY4 423 aa18.12■□□□□ 0.49
LINC00398-201ENST00000414407 MRPL4Q9BYD3 311 aaKnown RBP18.12■□□□□ 0.49
LINC00398-201ENST00000414407 RC3H2Q9HBD1 1191 aaKnown RBP18.12■□□□□ 0.49
LINC00398-201ENST00000414407 LAMA2P24043 3122 aaKnown RBP18.12■□□□□ 0.49
LINC00398-201ENST00000414407 PTPRSQ13332 1948 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 MYH11P35749 1972 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 K7ENM7 598 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 LIG1P18858 919 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 PBX2P40425 430 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 AFMP43652 599 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 UBE2HP62256 183 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 ASIC1P78348 528 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 SNW1Q13573 536 aaKnown RBP18.11■□□□□ 0.49
LINC00398-201ENST00000414407 ALCAMQ13740 583 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 NT5DC1Q5TFE4 455 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 FAM117BQ6P1L5 589 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 ZPBP2Q6X784 338 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 UNC13DQ70J99 1090 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 APBB1IPQ7Z5R6 666 aaPredicted RBP18.11■□□□□ 0.49
LINC00398-201ENST00000414407 TIFAQ96CG3 184 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 PGBD4Q96DM1 585 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 TIGD1Q96MW7 591 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 YME1L1Q96TA2 773 aa18.11■□□□□ 0.49
LINC00398-201ENST00000414407 STRA6Q9BX79 667 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms