RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DDX56Q9NY93 547 aaKnown RBP18.45■□□□□ 0.54
PHRF1-202ENST00000413872 KLHL8Q9P2G9 620 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-202ENST00000413872 CSPG5O95196 566 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 CA4P22748 312 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 ALS2CLQ60I27 953 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 MAGEB5Q9BZ81 275 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 RGL1Q9NZL6 768 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 PIN4Q9Y237 131 aaKnown RBP18.44■□□□□ 0.54
PHRF1-202ENST00000413872 APOEP02649 317 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 SLC4A1P02730 911 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 GTF2A1P52655 376 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-202ENST00000413872 ARL4CP56559 192 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 DBN1Q16643 649 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 BCAS4Q8TDM0 211 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 C6orf222P0C671 652 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-202ENST00000413872 PAPOLAP51003 745 aaKnown RBP18.44■□□□□ 0.54
PHRF1-202ENST00000413872 TMED2Q15363 201 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 KIAA1755Q5JYT7 1200 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 EMBQ6PCB8 327 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 FAF2Q96CS3 445 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 NUDT12Q9BQG2 462 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 MST1RQ04912 1400 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 RASGRF2O14827 1237 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 EFHC2Q5JST6 749 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 COL23A1Q86Y22 540 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-202ENST00000413872 ZNF564Q8TBZ8 553 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-202ENST00000413872 HAUS8Q9BT25 410 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 JMJD4Q9H9V9 463 aa18.44■□□□□ 0.54
PHRF1-202ENST00000413872 HMGB1P1B2RPK0 211 aaPredicted RBP18.43■□□□□ 0.54
PHRF1-202ENST00000413872 ZDHHC15Q96MV8 337 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 PPP2R3BQ9Y5P8 575 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 PALMO75781 387 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 HSPA8P11142 646 aaKnown RBP18.43■□□□□ 0.54
PHRF1-202ENST00000413872 PLS3P13797 630 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 GTF2A2P52657 109 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 RBP5P82980 135 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 CLEC17AQ6ZS10 378 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 MYLK4Q86YV6 388 aaPredicted RBP18.43■□□□□ 0.54
PHRF1-202ENST00000413872 RRN3P2A6NIE6 340 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 RALAP11233 206 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 CPB1P15086 417 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 GANCQ8TET4 914 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 DEPDC1BQ8WUY9 529 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 KRT37O76014 449 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 ZFXP17010 805 aaPredicted RBP18.43■□□□□ 0.54
PHRF1-202ENST00000413872 TADA2BQ86TJ2 420 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 PASD1Q8IV76 773 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 GPRASP2Q96D09 838 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 MOV10L1Q9BXT6 1211 aaKnown RBP18.43■□□□□ 0.54
PHRF1-202ENST00000413872 PDE11AQ9HCR9 933 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 VCX3AQ9NNX9 186 aa18.43■□□□□ 0.54
PHRF1-202ENST00000413872 A0A1B0GUA9 196 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 HBP1O60381 514 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 SATB1Q01826 763 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 LLGL1Q15334 1064 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 HVCN1Q96D96 273 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 GPBP1L1Q9HC44 474 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-202ENST00000413872 ADARB2Q9NS39 739 aaKnown RBP18.42■□□□□ 0.54
PHRF1-202ENST00000413872 SOX5P35711 763 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 ADCY2Q08462 1091 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 TRPV6Q9H1D0 765 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 ANKEF1Q9NU02 776 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 ERAP1Q9NZ08 941 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 KCNJ6P48051 423 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 LAMC2Q13753 1193 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 TAF1BQ53T94 588 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-202ENST00000413872 SAMD7Q7Z3H4 446 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 DDX50Q9BQ39 737 aaKnown RBP18.42■□□□□ 0.54
PHRF1-202ENST00000413872 PIDD1Q9HB75 910 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 CNTNAP5Q8WYK1 1306 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 C6orf118Q5T5N4 469 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 SPOPLQ6IQ16 392 aa18.42■□□□□ 0.54
PHRF1-202ENST00000413872 FARP1Q9Y4F1 1045 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-202ENST00000413872 GAS2O43903 313 aaKnown RBP18.41■□□□□ 0.54
PHRF1-202ENST00000413872 RARBP10826 455 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 CCDC38Q502W7 563 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 RHOT1Q8IXI2 618 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 NUP85Q9BW27 656 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 ITPRIPL1Q6GPH6 555 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 AFG1LQ8WV93 481 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 AP1M1Q9BXS5 423 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 WNT8AQ9H1J5 351 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 POLD4Q9HCU8 107 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 SLC38A7Q9NVC3 462 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 CELF2O95319 508 aaKnown RBP18.41■□□□□ 0.54
PHRF1-202ENST00000413872 NMT1P30419 496 aaKnown RBP18.41■□□□□ 0.54
PHRF1-202ENST00000413872 ANTXR2P58335 489 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 EMC2Q15006 297 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 TRIP13Q15645 432 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-202ENST00000413872 EDRF1Q3B7T1 1238 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 HSPBP1Q9NZL4 362 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 H3BRJ5 948 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 FTLP02792 175 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-202ENST00000413872 CAP2P40123 477 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 CCDC197Q8NCU1 140 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 PRMT7Q9NVM4 692 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-202ENST00000413872 WDR35Q9P2L0 1181 aa18.41■□□□□ 0.54
PHRF1-202ENST00000413872 IL18RAPO95256 599 aa18.4■□□□□ 0.54
PHRF1-202ENST00000413872 CHEK2O96017 543 aa18.4■□□□□ 0.54
PHRF1-202ENST00000413872 CD4P01730 458 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms