RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 FOXP2O15409 715 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 MMP13P45452 471 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 PDE1CQ14123 709 aaPredicted RBP14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 DCUN1D2Q6PH85 259 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 FAXDC2Q96IV6 333 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 C9orf72Q96LT7 481 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 TRAIPQ9BWF2 469 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 EBF2Q9HAK2 575 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 ANKFY1Q9P2R3 1169 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 SALL4Q9UJQ4 1053 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 LCA5LO95447 670 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 FLT3P36888 993 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 DEUP1Q05D60 604 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 ZNF268Q14587 947 aaPredicted RBP14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 WDR78Q5VTH9 848 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 ZNF746Q6NUN9 644 aaPredicted RBP14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 RASSF3Q86WH2 238 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 RSAD2Q8WXG1 361 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 IMPG2Q9BZV3 1241 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 PNMA3Q9UL41 463 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 C3P01024 1663 aa14.84□□□□□ -0.03
CLTCL1-201ENST00000412649 NUDT17P0C025 328 aa14.83□□□□□ -0.03
CLTCL1-201ENST00000412649 COILP38432 576 aaPredicted RBP14.83□□□□□ -0.03
CLTCL1-201ENST00000412649 TTC17Q96AE7 1141 aa14.83□□□□□ -0.03
CLTCL1-201ENST00000412649 TMEM237Q96Q45 408 aa14.83□□□□□ -0.03
CLTCL1-201ENST00000412649 MON2Q7Z3U7 1717 aa14.83□□□□□ -0.03
CLTCL1-201ENST00000412649 UNC5CO95185 931 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 ATP6V1C1P21283 382 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 NSFP46459 744 aaKnown RBP14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 GRB10Q13322 594 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 IL17AQ16552 155 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 IZUMO3Q5VZ72 239 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 CWF19L1Q69YN2 538 aaKnown RBP14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 NUP85Q9BW27 656 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 STK33Q9BYT3 514 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 CDC42EP4Q9H3Q1 356 aaKnown RBP14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 TXNDC16Q9P2K2 825 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 C6orf229H3BNL8 230 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 ZCCHC18P0CG32 403 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 ERFP50548 548 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 CCDC125Q86Z20 511 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 OPTNQ96CV9 577 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 ZC3H4Q9UPT8 1303 aaKnown RBP14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 K7ENM7 598 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 SGK1O00141 431 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 PEX5P50542 639 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 MED21Q13503 144 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 C4orf33Q8N1A6 199 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 TAB3Q8N5C8 712 aaPredicted RBP14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 HEMGNQ9BXL5 484 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 BHMT2Q9H2M3 363 aa14.83□□□□□ -0.04
CLTCL1-201ENST00000412649 PDXKO00764 312 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 SMNDC1O75940 238 aaKnown RBP eCLIP14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 ADAMTS2O95450 1211 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 SERPINB3P29508 390 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 SNX30Q5VWJ9 437 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 SYDE1Q6ZW31 735 aaPredicted RBP14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 CADPS2Q86UW7 1296 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 CNBD1Q8NA66 436 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 DAGLBQ8NCG7 672 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 AGPAT1Q99943 283 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 INTS2Q9H0H0 1204 aaKnown RBP14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 OSGEPQ9NPF4 335 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 ANAPC7Q9UJX3 599 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 ZBTB21Q9ULJ3 1066 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 ADAMTS13Q76LX8 1427 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 NPHP3-ACAD11A0A0J9YXS1 232 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 MARCH10Q8NA82 808 aaPredicted RBP14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 PIP4K2CQ8TBX8 421 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 TSNARE1Q96NA8 513 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 SETDB2Q96T68 719 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 TRIM33Q9UPN9 1127 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 ABLIM1O14639 778 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 ACBD5Q5T8D3 534 aaPredicted RBP14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 NT5DC3Q86UY8 548 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 PYROXD1Q8WU10 500 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 EXOC7Q9UPT5 735 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 TRAF3IP3Q9Y228 551 aa14.82□□□□□ -0.04
CLTCL1-201ENST00000412649 A8MUI8 341 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 F8W031 263 aaPredicted RBP14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 PTPN4P29074 926 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 EPHB2P29323 1055 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 RGS9BPQ6ZS82 235 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 MAP7D3Q8IWC1 876 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 PPP4R1Q8TF05 950 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 CCDC127Q96BQ5 260 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 DIP2BQ9P265 1576 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 RPS6KA3P51812 740 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 YWHAGP61981 247 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 USH1GQ495M9 461 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 HP1BP3Q5SSJ5 553 aaPredicted RBP14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 NLRP9Q7RTR0 991 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 HIPK4Q8NE63 616 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 TRIM11Q96F44 468 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 FNBP1Q96RU3 617 aa14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 MAK16Q9BXY0 300 aaKnown RBP14.81□□□□□ -0.04
CLTCL1-201ENST00000412649 RHBDL2Q9NX52 303 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms