RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 HADHBP55084 474 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 TGFB2P61812 414 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 HLTFQ14527 1009 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 CLUL1Q15846 466 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 C1orf220Q5T0J3 134 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 NLRX1Q86UT6 975 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 ARHGEF19Q8IW93 802 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 DDX47Q9H0S4 455 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 CCDC169A6NNP5 214 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 EGFRP00533 1210 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 CCND2P30279 289 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 MCCD1P59942 119 aaPredicted RBP12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 TRADDQ15628 312 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 DALRD3Q5D0E6 543 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 ZNF746Q6NUN9 644 aaPredicted RBP12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 OTUD6AQ7L8S5 288 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 TRMT1LQ7Z2T5 733 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 CD302Q8IX05 232 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 ARHGEF26Q96DR7 871 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 NAP1L3Q99457 506 aaPredicted RBP12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 MOV10L1Q9BXT6 1211 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 TMEM117Q9H0C3 514 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 CARD9Q9H257 536 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 RNF146Q9NTX7 359 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 TAS2R14Q9NYV8 317 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 TBX20Q9UMR3 447 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 PCDHA10Q9Y5I2 948 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 PFASO15067 1338 aa12.42□□□□□ -0.42
TRAFD1-202ENST00000412615 A6NNZ2 444 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 DKC1O60832 514 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 HSPA9P38646 679 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 DMP1Q13316 513 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 BAATQ14032 418 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 TCEAL1Q15170 157 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 PPP2R5EQ16537 467 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 TUBB8Q3ZCM7 444 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 PLA2G4FQ68DD2 849 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 VSIG10LQ86VR7 867 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 PALB2Q86YC2 1186 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 ARL8AQ96BM9 186 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 GPRASP2Q96D09 838 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 SENP7Q9BQF6 1050 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 C17orf75Q9HAS0 396 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 IGSF9BQ9UPX0 1349 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 BHMG1C9JSJ3 638 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 DDX3YO15523 660 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 FTLP02792 175 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 CNGA1P29973 690 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 BACE1P56817 501 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 SNRNP35Q16560 246 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 MAP4K3Q8IVH8 894 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 RPUSD2Q8IZ73 545 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 TMEM161BQ8NDZ6 487 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 PLEKHO2Q8TD55 490 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 SLC20A1Q8WUM9 679 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 LRRC45Q96CN5 670 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 ATG4CQ96DT6 458 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 NTPCRQ9BSD7 190 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 AS3MTQ9HBK9 375 aa12.41□□□□□ -0.42
TRAFD1-202ENST00000412615 GOLGA8IPA6NC78 632 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 GOLGA8JA6NMD2 632 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 FGGP02679 453 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 NR3C2P08235 984 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 ITGA4P13612 1032 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 USP8P40818 1118 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 NPTX2P47972 431 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 MFAP3P55082 362 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 GPC5P78333 572 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 TTMPQ5BVD1 217 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 KRT39Q6A163 491 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 ANO5Q75V66 913 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 SPIRE2Q8WWL2 714 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 KIFAP3Q92845 792 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 ATP6V0A1Q93050 837 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 CAPS2Q9BXY5 557 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 KMT5AQ9NQR1 393 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 AMACRQ9UHK6 382 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 RIPK3Q9Y572 518 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 ZNF233A6NK53 670 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 RTN2O75298 545 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 PPFIA4O75335 1185 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 KRT14P02533 472 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 ADRB2P07550 413 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 BAG6P46379 1132 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 OAZ1P54368 228 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 PRPF4BQ13523 1007 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 USP37Q86T82 979 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 CBWD2Q8IUF1 395 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 FAM71AQ8IYT1 594 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 C1orf131Q8NDD1 294 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 ZSWIM2Q8NEG5 633 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 PIK3R5Q8WYR1 880 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 CTTNBP2NLQ9P2B4 639 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 HACL1Q9UJ83 578 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 COG5Q9UP83 839 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 BCS1LQ9Y276 419 aa12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 UTP11Q9Y3A2 253 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-202ENST00000412615 GOLGB1Q14789 3259 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms