RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 NSUN3Q9H649 340 aaKnown RBP20.84■□□□□ 0.93
TRIM56-202ENST00000412507 INPP5FQ9Y2H2 1132 aa20.84■□□□□ 0.93
TRIM56-202ENST00000412507 CITO14578 2027 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 OFD1O75665 1012 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 SSBP05455 408 aaKnown RBP eCLIP20.83■□□□□ 0.93
TRIM56-202ENST00000412507 PBX3P40426 434 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 UBA7P41226 1012 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 CEBPZQ03701 1054 aaKnown RBP20.83■□□□□ 0.93
TRIM56-202ENST00000412507 TMEM119Q4V9L6 283 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 KCNT2Q6UVM3 1135 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 GLB1LQ6UWU2 654 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 C1orf186Q6ZWK4 172 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 SPRYD3Q8NCJ5 442 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 DEPTORQ8TB45 409 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 CCDC51Q96ER9 411 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 IFT74Q96LB3 600 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 MRPL9Q9BYD2 267 aaKnown RBP20.83■□□□□ 0.93
TRIM56-202ENST00000412507 CSRNP2Q9H175 543 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 C2orf40Q9H1Z8 148 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 FZD8Q9H461 694 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 ZSCAN16Q9H4T2 348 aaPredicted RBP20.83■□□□□ 0.93
TRIM56-202ENST00000412507 PRMT7Q9NVM4 692 aaPredicted RBP20.83■□□□□ 0.93
TRIM56-202ENST00000412507 COG5Q9UP83 839 aa20.83■□□□□ 0.93
TRIM56-202ENST00000412507 TCHHQ07283 1943 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 HIP1RO75146 1068 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 FGF18O76093 207 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 LIG1P18858 919 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 NCLP19338 710 aaKnown RBP20.82■□□□□ 0.92
TRIM56-202ENST00000412507 MARCKSP29966 332 aaPredicted RBP20.82■□□□□ 0.92
TRIM56-202ENST00000412507 LONP1P36776 959 aaKnown RBP20.82■□□□□ 0.92
TRIM56-202ENST00000412507 MRPS5P82675 430 aaKnown RBP20.82■□□□□ 0.92
TRIM56-202ENST00000412507 CSPP1Q1MSJ5 1256 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 NOMO2Q5JPE7 1267 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 PPP4R3CPQ6ZMV5 832 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 CNNM3Q8NE01 707 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 HLA-CQ95604 372 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 PRIMPOLQ96LW4 560 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 ZNF558Q96NG5 402 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 KIFC3Q9BVG8 833 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 RSAD1Q9HA92 442 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 IPPQ9Y573 584 aa20.82■□□□□ 0.92
TRIM56-202ENST00000412507 NCOR1O75376 2440 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 TTLL13PA6NNM8 815 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 PRKCBP05771 671 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 PLA2G4BP0C869 781 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 ITGA4P13612 1032 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 IRS1P35568 1242 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 FAM187BQ17R55 369 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 DAW1Q8N136 415 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 KCTD17Q8N5Z5 321 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 SYT2Q8N9I0 419 aaPredicted RBP20.81■□□□□ 0.92
TRIM56-202ENST00000412507 CALML4Q96GE6 196 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 ASB2Q96Q27 587 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 USP28Q96RU2 1077 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 TBC1D13Q9NVG8 400 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 USP20Q9Y2K6 914 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 HES2Q9Y543 173 aa20.81■□□□□ 0.92
TRIM56-202ENST00000412507 CNTNAP2Q9UHC6 1331 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 XIRP2A4UGR9 3374 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 A0A1B0GUA9 196 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 SLC26A4O43511 780 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 NPTXRO95502 500 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 EDN1P05305 212 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 AFF1P51825 1210 aaKnown RBP20.8■□□□□ 0.92
TRIM56-202ENST00000412507 RNASELQ05823 741 aaKnown RBP20.8■□□□□ 0.92
TRIM56-202ENST00000412507 RAD51AP2Q09MP3 1159 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 MAPK7Q13164 816 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 KARSQ15046 597 aaKnown RBP20.8■□□□□ 0.92
TRIM56-202ENST00000412507 MAPK6Q16659 721 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 TJAP1Q5JTD0 557 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 FOXD4L5Q5VV16 416 aaPredicted RBP20.8■□□□□ 0.92
TRIM56-202ENST00000412507 SLC27A1Q6PCB7 646 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 LRRC15Q8TF66 581 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 FOXD4L4Q8WXT5 416 aaPredicted RBP20.8■□□□□ 0.92
TRIM56-202ENST00000412507 RSPH1Q8WYR4 309 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 APOL6Q9BWW8 343 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 TRIM6Q9C030 488 aaPredicted RBP20.8■□□□□ 0.92
TRIM56-202ENST00000412507 CCDC113Q9H0I3 377 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 RNF39Q9H2S5 420 aa20.8■□□□□ 0.92
TRIM56-202ENST00000412507 UBE2ZQ9H832 354 aaPredicted RBP20.8■□□□□ 0.92
TRIM56-202ENST00000412507 FBXO2Q9UK22 296 aaPredicted RBP20.8■□□□□ 0.92
TRIM56-202ENST00000412507 CCDC169A6NNP5 214 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 SFI1A8K8P3 1242 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 NT5C1B-RDH14C9J2C7 533 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 ZC3H11AO75152 810 aaKnown RBP eCLIP20.79■□□□□ 0.922e-6■■□□□ 13
TRIM56-202ENST00000412507 SLC12A3P55017 1021 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 PEX3P56589 373 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 BCAR1P56945 870 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 PLCB3Q01970 1234 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 UBE3AQ05086 875 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 PRPF4BQ13523 1007 aaKnown RBP20.79■□□□□ 0.92
TRIM56-202ENST00000412507 TMEM132AQ24JP5 1023 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 SPECC1Q5M775 1068 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 RASSF8Q8NHQ8 419 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 URGCPQ8TCY9 931 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 DRC1Q96MC2 740 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 COL25A1Q9BXS0 654 aaPredicted RBP20.79■□□□□ 0.92
TRIM56-202ENST00000412507 GBP3Q9H0R5 595 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 NXF3Q9H4D5 531 aaKnown RBP20.79■□□□□ 0.92
TRIM56-202ENST00000412507 NRDE2Q9H7Z3 1164 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms