RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 SYT11Q9BT88 431 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 POLR3FQ9H1D9 316 aaPredicted RBP26.65■■□□□ 1.86
VRK2-202ENST00000412104 TARSL2A2RTX5 802 aaKnown RBP26.64■■□□□ 1.86
VRK2-202ENST00000412104 CCDC172P0C7W6 258 aa26.64■■□□□ 1.86
VRK2-202ENST00000412104 MXI1P50539 228 aa26.64■■□□□ 1.86
VRK2-202ENST00000412104 ERO1BQ86YB8 467 aa26.64■■□□□ 1.86
VRK2-202ENST00000412104 TMEM117Q9H0C3 514 aa26.64■■□□□ 1.86
VRK2-202ENST00000412104 ZNF302Q9NR11 478 aa26.64■■□□□ 1.86
VRK2-202ENST00000412104 H2AFZP0C0S5 128 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 ATP4AP20648 1035 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 CCDC181Q5TID7 509 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 H2AFVQ71UI9 128 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 ARHGEF19Q8IW93 802 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 PAGR1Q9BTK6 254 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 INTUQ9ULD6 942 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 MAFBQ9Y5Q3 323 aaPredicted RBP26.63■■□□□ 1.85
VRK2-202ENST00000412104 SOWAHBA6NEL2 793 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 PMM2O15305 246 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 LRRN2O75325 713 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 UBA1P22314 1058 aaKnown RBP26.63■■□□□ 1.85
VRK2-202ENST00000412104 EDNRBP24530 442 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 EMC2Q15006 297 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 MOB2Q70IA6 237 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 GLYCTKQ8IVS8 523 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 ANKRD13AQ8IZ07 590 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 MMGT1Q8N4V1 131 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 SPATA4Q8NEY3 305 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 CDCA5Q96FF9 252 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 IFT74Q96LB3 600 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 UBE2TQ9NPD8 197 aaPredicted RBP26.63■■□□□ 1.85
VRK2-202ENST00000412104 SMARCAL1Q9NZC9 954 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 EHD2Q9NZN4 543 aa26.63■■□□□ 1.85
VRK2-202ENST00000412104 OATP04181 439 aa26.62■■□□□ 1.85
VRK2-202ENST00000412104 KIF22Q14807 665 aa26.62■■□□□ 1.85
VRK2-202ENST00000412104 IFI16Q16666 785 aaKnown RBP26.62■■□□□ 1.85
VRK2-202ENST00000412104 C9orf131Q5VYM1 1079 aa26.62■■□□□ 1.85
VRK2-202ENST00000412104 ASCC2Q9H1I8 757 aaPredicted RBP26.62■■□□□ 1.85
VRK2-202ENST00000412104 ARHGAP28Q9P2N2 729 aa26.62■■□□□ 1.85
VRK2-202ENST00000412104 SPDYE5A6NIY4 337 aa26.61■■□□□ 1.85
VRK2-202ENST00000412104 FOXN3O00409 490 aaPredicted RBP26.61■■□□□ 1.85
VRK2-202ENST00000412104 CNMDO75829 334 aa26.61■■□□□ 1.85
VRK2-202ENST00000412104 PAFAH1B1P43034 410 aa26.61■■□□□ 1.85
VRK2-202ENST00000412104 FBXL18Q96ME1 805 aa26.61■■□□□ 1.85
VRK2-202ENST00000412104 PACSIN2Q9UNF0 486 aaPredicted RBP26.61■■□□□ 1.85
VRK2-202ENST00000412104 A0A0A6YYK5 440 aaPredicted RBP26.61■■□□□ 1.85
VRK2-202ENST00000412104 CXCL11O14625 94 aa26.61■■□□□ 1.85
VRK2-202ENST00000412104 MAP2K7O14733 419 aa26.61■■□□□ 1.85
VRK2-202ENST00000412104 HNRNPDLO14979 420 aaKnown RBP26.61■■□□□ 1.85
VRK2-202ENST00000412104 YBX3P16989 372 aaKnown RBP eCLIP26.61■■□□□ 1.856e-6■□□□□ 10.9
VRK2-202ENST00000412104 MCM3P25205 808 aa26.61■■□□□ 1.85
VRK2-202ENST00000412104 NOP2P46087 812 aaKnown RBP26.61■■□□□ 1.85
VRK2-202ENST00000412104 POLGP54098 1239 aaPredicted RBP26.61■■□□□ 1.85
VRK2-202ENST00000412104 TAS1R3Q7RTX0 852 aa26.61■■□□□ 1.85
VRK2-202ENST00000412104 POMGNT1Q8WZA1 660 aa26.61■■□□□ 1.85
VRK2-202ENST00000412104 VTI1AQ96AJ9 217 aa26.61■■□□□ 1.85
VRK2-202ENST00000412104 NF2P35240 595 aa26.6■■□□□ 1.85
VRK2-202ENST00000412104 LRRC57Q8N9N7 239 aa26.6■■□□□ 1.85
VRK2-202ENST00000412104 PARD3BQ8TEW8 1205 aa26.6■■□□□ 1.85
VRK2-202ENST00000412104 CCDC127Q96BQ5 260 aa26.6■■□□□ 1.85
VRK2-202ENST00000412104 ST7Q9NRC1 585 aa26.6■■□□□ 1.85
VRK2-202ENST00000412104 L1RE1Q9UN81 338 aa26.6■■□□□ 1.85
VRK2-202ENST00000412104 USP20Q9Y2K6 914 aa26.6■■□□□ 1.85
VRK2-202ENST00000412104 IGKV6D-21A0A0A0MT36 114 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 LRRIQ3A6PVS8 624 aaPredicted RBP26.59■■□□□ 1.85
VRK2-202ENST00000412104 H0YCG3 227 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 FARP2O94887 1054 aaPredicted RBP26.59■■□□□ 1.85
VRK2-202ENST00000412104 DNA2P51530 1060 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 MAP2K1Q02750 393 aaPredicted RBP26.59■■□□□ 1.85
VRK2-202ENST00000412104 BRDTQ58F21 947 aaPredicted RBP26.59■■□□□ 1.85
VRK2-202ENST00000412104 MS4A14Q96JA4 679 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 RNF14Q9UBS8 474 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 AGTPBP1Q9UPW5 1226 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 KCNH4Q9UQ05 1017 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 GALCP54803 685 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 TTLL12Q14166 644 aaPredicted RBP26.59■■□□□ 1.85
VRK2-202ENST00000412104 CFAP221Q4G0U5 840 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 TPCN2Q8NHX9 752 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 BICD1Q96G01 975 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 MFSD14AQ96MC6 490 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 R3HDMLQ9H3Y0 253 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 SUGCTQ9HAC7 445 aa26.59■■□□□ 1.85
VRK2-202ENST00000412104 GARTP22102 1010 aa26.58■■□□□ 1.85
VRK2-202ENST00000412104 KRT39Q6A163 491 aa26.58■■□□□ 1.85
VRK2-202ENST00000412104 CCDC70Q6NSX1 233 aa26.58■■□□□ 1.85
VRK2-202ENST00000412104 HDXQ7Z353 690 aa26.58■■□□□ 1.85
VRK2-202ENST00000412104 TMC2Q8TDI7 906 aa26.58■■□□□ 1.85
VRK2-202ENST00000412104 UBXN6Q9BZV1 441 aa26.58■■□□□ 1.85
VRK2-202ENST00000412104 DHX33Q9H6R0 707 aaKnown RBP26.58■■□□□ 1.85
VRK2-202ENST00000412104 SIP14410 1827 aa26.58■■□□□ 1.85
VRK2-202ENST00000412104 GSTTP1A0A1W2PQM5 241 aa26.57■■□□□ 1.84
VRK2-202ENST00000412104 TNFAIP3P21580 790 aa26.57■■□□□ 1.84
VRK2-202ENST00000412104 ABCD1P33897 745 aa26.57■■□□□ 1.84
VRK2-202ENST00000412104 CYP24A1Q07973 514 aa26.57■■□□□ 1.84
VRK2-202ENST00000412104 PPIL2Q13356 520 aa26.57■■□□□ 1.84
VRK2-202ENST00000412104 GPD1LQ8N335 351 aa26.57■■□□□ 1.84
VRK2-202ENST00000412104 TMEM143Q96AN5 459 aa26.57■■□□□ 1.84
VRK2-202ENST00000412104 SYT17Q9BSW7 474 aa26.57■■□□□ 1.84
VRK2-202ENST00000412104 GOLPH3Q9H4A6 298 aa26.57■■□□□ 1.84
VRK2-202ENST00000412104 TMEM8AQ9HCN3 771 aa26.57■■□□□ 1.84
VRK2-202ENST00000412104 PRDM10Q9NQV6 1147 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms