RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 UNC119BA6NIH7 251 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 MAFGO15525 162 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 HLA-DOAP06340 250 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 ATP2B1P20020 1258 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 BMPR1AP36894 532 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 KIF11P52732 1056 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 MAN2A1Q16706 1144 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 MTERF2Q49AM1 385 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 BRAPQ7Z569 592 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 FAM98AQ8NCA5 519 aaKnown RBP3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 ZNF384Q8TF68 577 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 DHRS4Q9BTZ2 278 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 DUSP26Q9BV47 211 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 BOCQ9BWV1 1114 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 CPEB1Q9BZB8 566 aaKnown RBP3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 HAPLN2Q9GZV7 340 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 SHROOM4Q9ULL8 1493 aa3.67□□□□□ -1.82
HMGB3P2-201ENST00000411913 LOC105371045A0A1W2PR82 267 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 DNAJC9-AS1A6NH13 148 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 DIAPH1O60610 1272 aaKnown RBP3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 EFCAB14O75071 495 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 FSBPO95073 299 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 ESRRBO95718 433 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 IGLV2-14P01704 120 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 ZBTB48P10074 688 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 RNASE9P60153 205 aaKnown RBP3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 BLOC1S1P78537 153 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 RAB33AQ14088 237 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 DDB1Q16531 1140 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 BEAN1Q3B7T3 259 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 TMEM177Q53S58 311 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 ABHD17BQ5VST6 288 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 PLXDC1Q8IUK5 500 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 IGSF22Q8N9C0 903 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 CPEB3Q8NE35 698 aaKnown RBP3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 SLC9A6Q92581 669 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 EXOC2Q96KP1 924 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 SLC52A2Q9HAB3 445 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 ING3Q9NXR8 418 aa3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 PPP1R1BQ9UD71 204 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 MRPS23Q9Y3D9 190 aaKnown RBP3.66□□□□□ -1.82
HMGB3P2-201ENST00000411913 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 PRR5-ARHGAP8B1AHC4 643 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 LEFTY2O00292 366 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 DDX6P26196 483 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 CASRP41180 1078 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 RBL2Q08999 1139 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 FOXF2Q12947 444 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 MPP3Q13368 585 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 SRRM1Q8IYB3 904 aaKnown RBP3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 ZNF366Q8N895 744 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 IL17RAQ96F46 866 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 BRIP1Q9BX63 1249 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 OSBPL6Q9BZF3 934 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 PCIF1Q9H4Z3 704 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 SPON1Q9HCB6 807 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 ACSS2Q9NR19 701 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 RNF181Q9P0P0 153 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 CLCA2Q9UQC9 943 aa3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 TNPO3Q9Y5L0 923 aaKnown RBP3.65□□□□□ -1.83
HMGB3P2-201ENST00000411913 PDPK1O15530 556 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 ALDH1A2O94788 518 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 APOL3O95236 402 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 NPTXRO95502 500 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 CFBP00751 764 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 FAM153BP0C7A2 387 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 SPATA31D3P0C874 917 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 HSP90B1P14625 803 aaKnown RBP3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 WNT3AP56704 352 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 MXRA7P84157 204 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 NHLH2Q02577 135 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 ADCY2Q08462 1091 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 MAPK7Q13164 816 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 TP53BP2Q13625 1128 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 ARHGAP44Q17R89 818 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 SPATA31D4Q6ZUB0 917 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 ARHGEF25Q86VW2 580 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 NME9Q86XW9 330 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 SLC44A3Q8N4M1 653 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 LSM14BQ9BX40 385 aaKnown RBP3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 ENKD1Q9H0I2 346 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 MTG2Q9H4K7 406 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 DKK2Q9UBU2 259 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 CHST2Q9Y4C5 530 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 NISCHQ9Y2I1 1504 aa3.64□□□□□ -1.83
HMGB3P2-201ENST00000411913 A0A0A6YYJ9 748 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 CCDC85CA6NKD9 419 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 DIRC3C9JPN6 131 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 RBMXL2O75526 392 aaKnown RBP3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 CYP17A1P05093 508 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 GAAP10253 952 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 ZSCAN20P17040 1043 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 GTF2F1P35269 517 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 MPLP40238 635 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 GZMKP49863 264 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 ZNF81P51508 661 aa3.63□□□□□ -1.83
HMGB3P2-201ENST00000411913 MRPL49Q13405 166 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms