RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 GNL2Q13823 731 aaKnown RBP24.83■■□□□ 1.57
MSH6-202ENST00000411819 KCNC3Q14003 757 aa24.83■■□□□ 1.57
MSH6-202ENST00000411819 UBXN11Q5T124 520 aa24.83■■□□□ 1.57
MSH6-202ENST00000411819 VPS52Q8N1B4 723 aa24.83■■□□□ 1.57
MSH6-202ENST00000411819 MRPL43Q8N983 215 aaKnown RBP24.83■■□□□ 1.57
MSH6-202ENST00000411819 TMEM87AQ8NBN3 555 aa24.83■■□□□ 1.57
MSH6-202ENST00000411819 ASAP3Q8TDY4 903 aa24.83■■□□□ 1.57
MSH6-202ENST00000411819 IGSF21Q96ID5 467 aa24.83■■□□□ 1.57
MSH6-202ENST00000411819 RPGRIP1Q96KN7 1286 aa24.83■■□□□ 1.57
MSH6-202ENST00000411819 LLPHQ9BRT6 129 aaKnown RBP24.83■■□□□ 1.57
MSH6-202ENST00000411819 PHF7Q9BWX1 381 aaPredicted RBP24.83■■□□□ 1.57
MSH6-202ENST00000411819 DNAJB4Q9UDY4 337 aa24.83■■□□□ 1.57
MSH6-202ENST00000411819 CNTNAP2Q9UHC6 1331 aa24.83■■□□□ 1.56
MSH6-202ENST00000411819 A0A087WWV3 80 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 TSPAN1O60635 241 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 GALTP07902 379 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 PTENP60484 403 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 CAPSQ13938 189 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 TMEM184AQ6ZMB5 413 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 FAM184AQ8NB25 1140 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 AUTS2Q8WXX7 1259 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 CASP10Q92851 521 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 FAM122AQ96E09 287 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 CPB2Q96IY4 423 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 ZBP1Q9H171 429 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 HCFC2Q9Y5Z7 792 aa24.82■■□□□ 1.56
MSH6-202ENST00000411819 CXCL14O95715 111 aa24.81■■□□□ 1.56
MSH6-202ENST00000411819 SLC11A1P49279 550 aa24.81■■□□□ 1.56
MSH6-202ENST00000411819 NCBP1Q09161 790 aaKnown RBP24.81■■□□□ 1.56
MSH6-202ENST00000411819 NOTUMQ6P988 496 aa24.81■■□□□ 1.56
MSH6-202ENST00000411819 MRPL10Q7Z7H8 261 aaKnown RBP24.81■■□□□ 1.56
MSH6-202ENST00000411819 ZNF280BQ86YH2 543 aa24.81■■□□□ 1.56
MSH6-202ENST00000411819 BCL7CQ8WUZ0 217 aaPredicted RBP24.81■■□□□ 1.56
MSH6-202ENST00000411819 SUSD6Q92537 303 aa24.81■■□□□ 1.56
MSH6-202ENST00000411819 ZSCAN31Q96LW9 406 aaPredicted RBP24.81■■□□□ 1.56
MSH6-202ENST00000411819 FAM193BQ96PV7 902 aaPredicted RBP24.81■■□□□ 1.56
MSH6-202ENST00000411819 POLR3FQ9H1D9 316 aaPredicted RBP24.81■■□□□ 1.56
MSH6-202ENST00000411819 LOC730098B7Z3J9 87 aa24.8■■□□□ 1.56
MSH6-202ENST00000411819 B4GALT3O60512 393 aa24.8■■□□□ 1.56
MSH6-202ENST00000411819 ITGA4P13612 1032 aa24.8■■□□□ 1.56
MSH6-202ENST00000411819 AXLP30530 894 aa24.8■■□□□ 1.56
MSH6-202ENST00000411819 PLA2G5P39877 138 aa24.8■■□□□ 1.56
MSH6-202ENST00000411819 HMGN5P82970 282 aaKnown RBP24.8■■□□□ 1.56
MSH6-202ENST00000411819 CBX2Q14781 532 aaPredicted RBP24.8■■□□□ 1.56
MSH6-202ENST00000411819 PCBP1Q15365 356 aaKnown RBP eCLIP24.8■■□□□ 1.56
MSH6-202ENST00000411819 ZNF174Q15697 407 aa24.8■■□□□ 1.56
MSH6-202ENST00000411819 HERC4Q5GLZ8 1057 aaPredicted RBP24.8■■□□□ 1.56
MSH6-202ENST00000411819 SYCE2Q6PIF2 218 aa24.8■■□□□ 1.56
MSH6-202ENST00000411819 MAEAQ7L5Y9 396 aa24.8■■□□□ 1.56
MSH6-202ENST00000411819 DDX53Q86TM3 631 aaKnown RBP24.8■■□□□ 1.56
MSH6-202ENST00000411819 CNNM3Q8NE01 707 aa24.8■■□□□ 1.56
MSH6-202ENST00000411819 EIF2AQ9BY44 585 aaKnown RBP24.8■■□□□ 1.56
MSH6-202ENST00000411819 IPPQ9Y573 584 aa24.8■■□□□ 1.56
MSH6-202ENST00000411819 CLASP2O75122 1294 aaKnown RBP24.79■■□□□ 1.56
MSH6-202ENST00000411819 POMCP01189 267 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 OR52Z1P0C646 297 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 HOXB8P17481 243 aaPredicted RBP24.79■■□□□ 1.56
MSH6-202ENST00000411819 NCLP19338 710 aaKnown RBP24.79■■□□□ 1.56
MSH6-202ENST00000411819 GLRA2P23416 452 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 ARL2P36404 184 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 AFF1P51825 1210 aaKnown RBP24.79■■□□□ 1.56
MSH6-202ENST00000411819 MBTD1Q05BQ5 628 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 TPRNQ4KMQ1 711 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 SMG8Q8ND04 991 aaKnown RBP24.79■■□□□ 1.56
MSH6-202ENST00000411819 CCDC51Q96ER9 411 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 APOL6Q9BWW8 343 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 TRIM6Q9C030 488 aaPredicted RBP24.79■■□□□ 1.56
MSH6-202ENST00000411819 S1PR5Q9H228 398 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 FOXP1Q9H334 677 aaPredicted RBP24.79■■□□□ 1.56
MSH6-202ENST00000411819 TUFT1Q9NNX1 390 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 SH2B1Q9NRF2 756 aaPredicted RBP24.79■■□□□ 1.56
MSH6-202ENST00000411819 KANSL3Q9P2N6 904 aa24.79■■□□□ 1.56
MSH6-202ENST00000411819 MED24O75448 989 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 DDHD2O94830 711 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 SPATA31C1P0DKV0 1188 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 CTSAP10619 480 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 POU5F1BQ06416 359 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 C8orf34Q49A92 452 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 TTC38Q5R3I4 469 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 CATSPER3Q86XQ3 398 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 IFNLR1Q8IU57 520 aaPredicted RBP24.78■■□□□ 1.56
MSH6-202ENST00000411819 ERMNQ8TAM6 284 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 UBN1Q9NPG3 1134 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 GPRC5CQ9NQ84 441 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 HES2Q9Y543 173 aa24.78■■□□□ 1.56
MSH6-202ENST00000411819 TDRD15B5MCY1 1934 aaKnown RBP24.78■■□□□ 1.56
MSH6-202ENST00000411819 LRRIQ4A6NIV6 560 aa24.77■■□□□ 1.56
MSH6-202ENST00000411819 SP100P23497 879 aaPredicted RBP24.77■■□□□ 1.56
MSH6-202ENST00000411819 MLH1P40692 756 aa24.77■■□□□ 1.56
MSH6-202ENST00000411819 ORC2Q13416 577 aaPredicted RBP24.77■■□□□ 1.56
MSH6-202ENST00000411819 GIT2Q14161 759 aa24.77■■□□□ 1.56
MSH6-202ENST00000411819 POTEGQ6S5H5 508 aa24.77■■□□□ 1.56
MSH6-202ENST00000411819 FBXO18Q8NFZ0 1043 aa24.77■■□□□ 1.56
MSH6-202ENST00000411819 CSRNP2Q9H175 543 aa24.77■■□□□ 1.56
MSH6-202ENST00000411819 FAN1Q9Y2M0 1017 aa24.77■■□□□ 1.56
MSH6-202ENST00000411819 SSBP05455 408 aaKnown RBP eCLIP24.76■■□□□ 1.55
MSH6-202ENST00000411819 XRCC6P12956 609 aaKnown RBP eCLIP24.76■■□□□ 1.552e-10■■□□□ 12.2
MSH6-202ENST00000411819 ARF4P18085 180 aaPredicted RBP24.76■■□□□ 1.55
MSH6-202ENST00000411819 RBM25P49756 843 aaKnown RBP24.76■■□□□ 1.55
MSH6-202ENST00000411819 AMHR2Q16671 573 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms