RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 GRPEL1Q9HAV7 217 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 AGPAT3Q9NRZ7 376 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 CDY2AQ9Y6F7 541 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 BICDL2A1A5D9 508 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 FSD2A1L4K1 749 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 CHRNA1P02708 482 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 ADSSP30520 456 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 LIG4P49917 911 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 ADAM9Q13443 819 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 HS2ST1Q7LGA3 356 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 TSG101Q99816 390 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 CCDC113Q9H0I3 377 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 TMEM206Q9H813 350 aa13.8□□□□□ -0.2
PMS1-204ENST00000409823 TYW1Q9NV66 732 aaKnown RBP13.8□□□□□ -0.2
PMS1-204ENST00000409823 GOLGA8IPA6NC78 632 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 GOLGA8JA6NMD2 632 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 MATR3P43243 847 aaKnown RBP eCLIP13.79□□□□□ -0.2
PMS1-204ENST00000409823 CASP4P49662 377 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 CDK7P50613 346 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 EFNA5P52803 228 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 TRIM60Q495X7 471 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 SEZ6Q53EL9 994 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 CEP135Q66GS9 1140 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 SLC39A5Q6ZMH5 540 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 ZBTB33Q86T24 672 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 SLC17A8Q8NDX2 589 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 TCHPQ9BT92 498 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 ATP11BQ9Y2G3 1177 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 SMTNL1A8MU46 457 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 PDXKO00764 312 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 IKBKBO14920 756 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 NR3C1P04150 777 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 CDK11BP21127 795 aaKnown RBP13.79□□□□□ -0.2
PMS1-204ENST00000409823 PPP1R2P41236 205 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 MRPS6P82932 125 aaKnown RBP13.79□□□□□ -0.2
PMS1-204ENST00000409823 LRRC63Q05C16 580 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 ALCAMQ13740 583 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 PTPN21Q16825 1174 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 ZNF618Q5T7W0 954 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 COL13A1Q5TAT6 717 aaPredicted RBP13.79□□□□□ -0.2
PMS1-204ENST00000409823 RSPH3Q86UC2 560 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 FAM126BQ8IXS8 530 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 SAAL1Q96ER3 474 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
PMS1-204ENST00000409823 C2orf40Q9H1Z8 148 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 PHLPP2Q6ZVD8 1323 aa13.79□□□□□ -0.2
PMS1-204ENST00000409823 AP5Z1O43299 807 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 EIF4BP23588 611 aaKnown RBP13.78□□□□□ -0.2
PMS1-204ENST00000409823 PRPF4BQ13523 1007 aaKnown RBP13.78□□□□□ -0.2
PMS1-204ENST00000409823 SNX17Q15036 470 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 ARMCX5Q6P1M9 558 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 IRF2BP1Q8IU81 584 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 POMGNT1Q8WZA1 660 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 CELF4Q9BZC1 486 aaKnown RBP13.78□□□□□ -0.2
PMS1-204ENST00000409823 HAPLN2Q9GZV7 340 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 KCNG1Q9UIX4 513 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 TRAF3IP3Q9Y228 551 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 H0YCG3 227 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 M0QZ92 97 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 CALUO43852 315 aaPredicted RBP13.78□□□□□ -0.2
PMS1-204ENST00000409823 ERLIN2O94905 339 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 COL6A1P12109 1028 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 DARSP14868 501 aaKnown RBP13.78□□□□□ -0.2
PMS1-204ENST00000409823 TLE2Q04725 743 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 PTK7Q13308 1070 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 LRRC55Q6ZSA7 311 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 ZNF410Q86VK4 478 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 FZD8Q9H461 694 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 TMEM134Q9H6X4 195 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 EXOC7Q9UPT5 735 aa13.78□□□□□ -0.2
PMS1-204ENST00000409823 CKBP12277 381 aa13.77□□□□□ -0.2
PMS1-204ENST00000409823 FKBP3Q00688 224 aaKnown RBP13.77□□□□□ -0.2
PMS1-204ENST00000409823 PTPN11Q06124 597 aaPredicted RBP13.77□□□□□ -0.2
PMS1-204ENST00000409823 NFX1Q12986 1120 aaKnown RBP13.77□□□□□ -0.2
PMS1-204ENST00000409823 AMHR2Q16671 573 aa13.77□□□□□ -0.2
PMS1-204ENST00000409823 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.2
PMS1-204ENST00000409823 CATSPER4Q7RTX7 472 aa13.77□□□□□ -0.2
PMS1-204ENST00000409823 NME8Q8N427 588 aa13.77□□□□□ -0.2
PMS1-204ENST00000409823 MRPL4Q9BYD3 311 aaKnown RBP13.77□□□□□ -0.2
PMS1-204ENST00000409823 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.2
PMS1-204ENST00000409823 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.2
PMS1-204ENST00000409823 UBE4BO95155 1302 aa13.77□□□□□ -0.2
PMS1-204ENST00000409823 UMODL1Q5DID0 1318 aa13.77□□□□□ -0.2
PMS1-204ENST00000409823 ACKR2O00590 384 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 AKAP3O75969 853 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 GHRP10912 638 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 ARF4P18085 180 aaPredicted RBP13.77□□□□□ -0.21
PMS1-204ENST00000409823 IBSPP21815 317 aaPredicted RBP13.77□□□□□ -0.21
PMS1-204ENST00000409823 OSTNP61366 133 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 LRRC26Q2I0M4 334 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 NFKBIZQ9BYH8 718 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 TSPAN1O60635 241 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 EXOC3O60645 756 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 CRYBB1P53674 252 aaPredicted RBP13.77□□□□□ -0.21
PMS1-204ENST00000409823 TRIM71Q2Q1W2 868 aaKnown RBP13.77□□□□□ -0.21
PMS1-204ENST00000409823 ZBTB41Q5SVQ8 909 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 ATF7IP2Q5U623 682 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 EEF1DP3Q658K8 133 aa13.77□□□□□ -0.21
PMS1-204ENST00000409823 ACO2Q99798 780 aaKnown RBP13.77□□□□□ -0.21
PMS1-204ENST00000409823 HSPBP1Q9NZL4 362 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms