RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 MAPK13O15264 365 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 AKR1B10O60218 316 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 NOL4O94818 638 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 NMT1P30419 496 aaKnown RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 NF2P35240 595 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 COPB2P35606 906 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 KIF11P52732 1056 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 PPATQ06203 517 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 EXOC3L4Q17RC7 722 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 LBX2Q6XYB7 198 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 GBP6Q6ZN66 633 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 FAM186BQ8IYM0 893 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 SLC35F6Q8N357 371 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 TSEN2Q8NCE0 465 aaKnown RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 SMCR8Q8TEV9 937 aaPredicted RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 SLC35C1Q96A29 364 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 BORCS6Q96GS4 357 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 PURBQ96QR8 312 aaKnown RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 ACCSQ96QU6 501 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 ARGLU1Q9NWB6 273 aaPredicted RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 ARHGAP20Q9P2F6 1191 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 ATP8B3O60423 1300 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 WDR90Q96KV7 1748 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 PAPPA2Q9BXP8 1791 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 CXCL11O14625 94 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 ZBTB39O15060 712 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 PJA2O43164 708 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 STAU1O95793 577 aaKnown RBP8.18□□□□□ -1.1
CXCR4-202ENST00000409817 TUBBP07437 444 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 PSAPP07602 524 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 ICAM3P32942 547 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 GRM5P41594 1212 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 POLR2FP61218 127 aaKnown RBP8.18□□□□□ -1.1
CXCR4-202ENST00000409817 ERVK-9P63128 1117 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 GTF2BQ00403 316 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 VGLL4Q14135 290 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 ASTE1Q2TB18 679 aaPredicted RBP8.18□□□□□ -1.1
CXCR4-202ENST00000409817 C10orf76Q5T2E6 689 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 PRAMEF18Q5VWM3 479 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 USP50Q70EL3 339 aaPredicted RBP8.18□□□□□ -1.1
CXCR4-202ENST00000409817 VASH1Q7L8A9 365 aaPredicted RBP8.18□□□□□ -1.1
CXCR4-202ENST00000409817 SRGAP1Q7Z6B7 1085 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 RIOX2Q8IUF8 465 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 SYCP3Q8IZU3 236 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 DAW1Q8N136 415 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 GPR161Q8N6U8 529 aaKnown RBP8.18□□□□□ -1.1
CXCR4-202ENST00000409817 TRIM58Q8NG06 486 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 RABGGTAQ92696 567 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 GOLGA1Q92805 767 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 WNK4Q96J92 1243 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 CDK15Q96Q40 435 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 CARD6Q9BX69 1037 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 IFIH1Q9BYX4 1025 aaKnown RBP8.18□□□□□ -1.1
CXCR4-202ENST00000409817 IRX2Q9BZI1 471 aaPredicted RBP8.18□□□□□ -1.1
CXCR4-202ENST00000409817 GANQ9H2C0 597 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 A1CFQ9NQ94 594 aaKnown RBP8.18□□□□□ -1.1
CXCR4-202ENST00000409817 AGPAT3Q9NRZ7 376 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 HCSTQ9UBK5 93 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 GUCA1BQ9UMX6 200 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 EXOC7Q9UPT5 735 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 A0A0G2JMZ2 1700 aa8.18□□□□□ -1.1
CXCR4-202ENST00000409817 PTPRFP10586 1907 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 TMEM229AB2RXF0 380 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 SPATA31C2B4DYI2 1134 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 H0YCG3 227 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 K7ENM7 598 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 P4HA2O15460 535 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 ATP9AO75110 1047 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 N4BP1O75113 896 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 EIF3JO75822 258 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 DDNO94850 711 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 CCNE2O96020 404 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 KCNA2P16389 499 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 WEE1P30291 646 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 EIF4A3P38919 411 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 SMTNP53814 917 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 RTP1P59025 263 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 ELF2Q15723 593 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 STXBP2Q15833 593 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 KLHDC7AQ5VTJ3 777 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 HGSNATQ68CP4 663 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 DNAJC14Q6Y2X3 702 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 INTS8Q75QN2 995 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 ERO1BQ86YB8 467 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 ANKRD13AQ8IZ07 590 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 RNF10Q8N5U6 811 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 MCPH1Q8NEM0 835 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 KIFAP3Q92845 792 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 KCNN1Q92952 543 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 SECISBP2LQ93073 1101 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 RPGRIP1Q96KN7 1286 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 MPHOSPH6Q99547 160 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 FHDC1Q9C0D6 1143 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 JPH1Q9HDC5 661 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 PKD2L1Q9P0L9 805 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 RNF181Q9P0P0 153 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 PCDHA13Q9Y5I0 950 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 POLR2AP24928 1970 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms