RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SPATA32Q96LK8 384 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 GUCD1Q96NT3 240 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 CDX2Q99626 313 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-205ENST00000409810 MRPL9Q9BYD2 267 aaKnown RBP12.03□□□□□ -0.48
CHMP3-205ENST00000409810 TMEM117Q9H0C3 514 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 RCOR1Q9UKL0 485 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 ZDHHC9Q9Y397 364 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 RBM19Q9Y4C8 960 aaKnown RBP12.03□□□□□ -0.48
CHMP3-205ENST00000409810 CNTNAP2Q9UHC6 1331 aa12.03□□□□□ -0.48
CHMP3-205ENST00000409810 CHD9Q3L8U1 2897 aa12.02□□□□□ -0.48
CHMP3-205ENST00000409810 K7ERI5 159 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 ACKR2O00590 384 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 FOSL2P15408 326 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 ARF4P18085 180 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-205ENST00000409810 LIG1P18858 919 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 SCP2P22307 547 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 HOXA11P31270 313 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-205ENST00000409810 ABCD1P33897 745 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 NPTX2P47972 431 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 RAD51AP2Q09MP3 1159 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 MAPK7Q13164 816 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 AMHR2Q16671 573 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 PAN2Q504Q3 1202 aaKnown RBP12.02□□□□□ -0.49
CHMP3-205ENST00000409810 SPOUT1Q5T280 376 aaKnown RBP12.02□□□□□ -0.49
CHMP3-205ENST00000409810 DAW1Q8N136 415 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 LRRC43Q8N309 656 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 SLC17A8Q8NDX2 589 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 FBXO22Q8NEZ5 403 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 SPIRE2Q8WWL2 714 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 MYLIPQ8WY64 445 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 CPB2Q96IY4 423 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 REEP2Q9BRK0 252 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 ADPGKQ9BRR6 497 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 KIFC3Q9BVG8 833 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 LRRC27Q9C0I9 530 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 CCDC113Q9H0I3 377 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 FZD8Q9H461 694 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 CUEDC2Q9H467 287 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 PRDM12Q9H4Q4 367 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 TMEM134Q9H6X4 195 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 CERS4Q9HA82 394 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 PARVGQ9HBI0 331 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 POLD4Q9HCU8 107 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 UBN1Q9NPG3 1134 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 AAASQ9NRG9 546 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 ARHGAP28Q9P2N2 729 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 PCDHA7Q9UN72 937 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 STXBP5LQ9Y2K9 1186 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 PCDHB2Q9Y5E7 798 aa12.02□□□□□ -0.49
CHMP3-205ENST00000409810 CITO14578 2027 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 A0A1B0GUA9 196 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 CARNS1A5YM72 827 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-205ENST00000409810 ARHGEF15O94989 841 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 RB1P06400 928 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 FGFR1P11362 822 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 CTNNB1P35222 781 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 AMPD3Q01432 767 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 STRN3Q13033 797 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 CSPP1Q1MSJ5 1256 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 EPC2Q52LR7 807 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 ARSHQ5FYA8 562 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 AXDND1Q5T1B0 1012 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-205ENST00000409810 SLC27A1Q6PCB7 646 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 SHC4Q6S5L8 630 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 GLB1LQ6UWU2 654 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
CHMP3-205ENST00000409810 TMEM192Q8IY95 271 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 MYCT1Q8N699 235 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 PDILTQ8N807 584 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 IQUBQ8NA54 791 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 URGCPQ8TCY9 931 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 LRRC15Q8TF66 581 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 LEO1Q8WVC0 666 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-205ENST00000409810 CLP1Q92989 425 aaKnown RBP12.01□□□□□ -0.49
CHMP3-205ENST00000409810 C17orf80Q9BSJ5 609 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 PLVAPQ9BX97 442 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 MRPL4Q9BYD3 311 aaKnown RBP12.01□□□□□ -0.49
CHMP3-205ENST00000409810 TNMDQ9H2S6 317 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 MAGEF1Q9HAY2 307 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 MTUS1Q9ULD2 1270 aa12.01□□□□□ -0.49
CHMP3-205ENST00000409810 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-205ENST00000409810 NPHP3-ACAD11A0A0J9YXS1 232 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 SFI1A8K8P3 1242 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 C5orf67F2Z3F1 127 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 SLC16A4O15374 487 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 B4GALT5O43286 388 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 SLC34A2O95436 690 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 ITGA4P13612 1032 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 ATF7P17544 494 aaPredicted RBP12□□□□□ -0.49
CHMP3-205ENST00000409810 LAG3P18627 525 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 GATMP50440 423 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 ZNF131P52739 623 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
CHMP3-205ENST00000409810 GIT2Q14161 759 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 DCAF4L1Q3SXM0 396 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 NAALADL2Q58DX5 795 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 RESP18Q5W5W9 173 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 ADALQ6DHV7 355 aa12□□□□□ -0.49
CHMP3-205ENST00000409810 HELQQ8TDG4 1101 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms