RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 GRIN2DO15399 1336 aa21.47■■□□□ 1.03
LIMS2-207ENST00000409808 A0A0A6YYK5 440 aaPredicted RBP21.46■■□□□ 1.03
LIMS2-207ENST00000409808 GTPBP10A4D1E9 387 aaKnown RBP21.46■■□□□ 1.03
LIMS2-207ENST00000409808 KIF4AO95239 1232 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 PON1P27169 355 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 SP2Q02086 613 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 CUL1Q13616 776 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 WDR78Q5VTH9 848 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 KDM7AQ6ZMT4 941 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 CASKIN2Q8WXE0 1202 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 EFCC1Q9HA90 598 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 WDR81Q562E7 1941 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 GFPT2O94808 682 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 MUTP22033 750 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 QARSP47897 775 aaKnown RBP21.46■■□□□ 1.03
LIMS2-207ENST00000409808 STXBP2Q15833 593 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 SEPT14Q6ZU15 432 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 ZNF571Q7Z3V5 609 aaPredicted RBP21.46■■□□□ 1.03
LIMS2-207ENST00000409808 DNERQ8NFT8 737 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 SCFD2Q8WU76 684 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 PACSIN1Q9BY11 444 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 ISCUQ9H1K1 167 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 TCEAL9Q9UHQ7 104 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 NAGPAQ9UK23 515 aa21.46■■□□□ 1.03
LIMS2-207ENST00000409808 TBCAO75347 108 aaKnown RBP21.45■■□□□ 1.02
LIMS2-207ENST00000409808 HSPA9P38646 679 aaKnown RBP21.45■■□□□ 1.02
LIMS2-207ENST00000409808 NPEPPSP55786 919 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 MAEAQ7L5Y9 396 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 SPATS2Q86XZ4 545 aaKnown RBP21.45■■□□□ 1.02
LIMS2-207ENST00000409808 NEK9Q8TD19 979 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 CCL15-CCL14A0A0B4J2E2 113 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 ARHGEF35A5YM69 484 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 WDR64B1ANS9 1081 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 ZEB2O60315 1214 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 CPP00450 1065 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 SLC9A1P19634 815 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 KRT76Q01546 638 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 CCL15Q16663 113 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 ALKBH5Q6P6C2 394 aaKnown RBP21.45■■□□□ 1.02
LIMS2-207ENST00000409808 LRIG3Q6UXM1 1119 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 LRRC57Q8N9N7 239 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 IWS1Q96ST2 819 aa21.45■■□□□ 1.02
LIMS2-207ENST00000409808 SPATA31C2B4DYI2 1134 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 BTBD19C9JJ37 291 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 CCDC188H7C350 402 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 PDHXO00330 501 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 MAFGO15525 162 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 FAM153BP0C7A2 387 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 GAP43P17677 238 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 CCT5P48643 541 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 FAM153CQ494X1 144 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 B4GALNT4Q76KP1 1039 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 EEPD1Q7L9B9 569 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 SYCE1Q8N0S2 351 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 C2orf69Q8N8R5 385 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 BRI3BPQ8WY22 251 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 PORCNQ9H237 461 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 PLEKHA4Q9H4M7 779 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 FAM153AQ9UHL3 310 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 NENFQ9UMX5 172 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 SRRM3A6NNA2 597 aaPredicted RBP21.44■■□□□ 1.02
LIMS2-207ENST00000409808 HMGB1P1B2RPK0 211 aaPredicted RBP21.44■■□□□ 1.02
LIMS2-207ENST00000409808 KCNK3O14649 394 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 FAM13AO94988 1023 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 TTC31Q49AM3 519 aaPredicted RBP21.44■■□□□ 1.02
LIMS2-207ENST00000409808 CST9Q5W186 159 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 MYCT1Q8N699 235 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 MYH11P35749 1972 aa21.44■■□□□ 1.02
LIMS2-207ENST00000409808 ZNFX1Q9P2E3 1918 aaKnown RBP21.43■■□□□ 1.02
LIMS2-207ENST00000409808 ZNF233A6NK53 670 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 RAD51CO43502 376 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 SLC25A27O95847 323 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 ACTN1P12814 892 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 HOXD13P35453 343 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 NOP2P46087 812 aaKnown RBP21.43■■□□□ 1.02
LIMS2-207ENST00000409808 JAK3P52333 1124 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 ERVK-9P63128 1117 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 NFIL3Q16649 462 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 GNPTABQ3T906 1256 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 PADI6Q6TGC4 694 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 SLFN11Q7Z7L1 901 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 PIK3R5Q8WYR1 880 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 ATXN2Q99700 1313 aaKnown RBP21.43■■□□□ 1.02
LIMS2-207ENST00000409808 NR3C1P04150 777 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 CETPP11597 493 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 FERP16591 822 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 NMT1P30419 496 aaKnown RBP21.43■■□□□ 1.02
LIMS2-207ENST00000409808 YWHABP31946 246 aaKnown RBP21.43■■□□□ 1.02
LIMS2-207ENST00000409808 JAM2P57087 298 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 KCNA1Q09470 495 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 ENOX2Q16206 610 aaKnown RBP21.43■■□□□ 1.02
LIMS2-207ENST00000409808 PLA2G4FQ68DD2 849 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 FMNL3Q8IVF7 1028 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 LRRC45Q96CN5 670 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 MAF1Q9H063 256 aa21.43■■□□□ 1.02
LIMS2-207ENST00000409808 SUCLA2Q9P2R7 463 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-207ENST00000409808 PACSIN2Q9UNF0 486 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-207ENST00000409808 BHMG1C9JSJ3 638 aaPredicted RBP21.42■■□□□ 1.02
LIMS2-207ENST00000409808 PGRMC1O00264 195 aaKnown RBP21.42■■□□□ 1.02
LIMS2-207ENST00000409808 H2AFZP0C0S5 128 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms