RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 USP8P40818 1118 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 MARCKSL1P49006 195 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 PLTPP55058 493 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 EIF3BP55884 814 aaKnown RBP16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 FKBP1AP62942 108 aaKnown RBP16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 DHX34Q14147 1143 aaKnown RBP16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 ZDHHC24Q6UX98 284 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 MAEAQ7L5Y9 396 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 RHOT2Q8IXI1 618 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 MDM1Q8TC05 714 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 ZNF622Q969S3 477 aaKnown RBP eCLIP16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 MASTLQ96GX5 879 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 KCND2Q9NZV8 630 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 SERPINA10Q9UK55 444 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 ATRNL1Q5VV63 1379 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 PTGIRP43119 386 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 BYSLQ13895 437 aaKnown RBP16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 C18orf8Q96DM3 657 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 SEC16BQ96JE7 1060 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 CSRNP1Q96S65 589 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 WDR11Q9BZH6 1224 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 PNMA2Q9UL42 364 aa16.37■□□□□ 0.21
LYSMD4-204ENST00000409796 C5orf60A6NFR6 353 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 K7ENM7 598 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 ONECUT3O60422 494 aaPredicted RBP16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 BCRP11274 1271 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 RFX1P22670 979 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 PMS2P54278 862 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 HADHBP55084 474 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 PPP3CAQ08209 521 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 ZNF746Q6NUN9 644 aaPredicted RBP16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 CCDC13Q8IYE1 715 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 RPUSD2Q8IZ73 545 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 FBXO25Q8TCJ0 367 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 CABS1Q96KC9 395 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 TEKT3Q9BXF9 490 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 CHORDC1Q9UHD1 332 aaPredicted RBP16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 DDX39AO00148 427 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 PHF2O75151 1096 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 ENTPD3O75355 529 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 VIL1P09327 827 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 PDE6BP35913 854 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 B3GNT9Q6UX72 402 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 CCDC121Q6ZUS5 278 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 ZDHHC14Q8IZN3 488 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 TATDN2Q93075 761 aa16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 RNF25Q96BH1 459 aaPredicted RBP16.36■□□□□ 0.21
LYSMD4-204ENST00000409796 PHF20L1A8MW92 1017 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 SPRED3Q2MJR0 410 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 C11orf63Q6NUN7 778 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 PRELID2Q8N945 189 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 OSBPL7Q9BZF2 842 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 PABPC3Q9H361 631 aaKnown RBP16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 GRHL1Q9NZI5 618 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 SYNGAP1Q96PV0 1343 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 KIF1CO43896 1103 aaKnown RBP16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 TRIM37O94972 964 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 NUDT17P0C025 328 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 GCLMP48507 274 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 VAMP7P51809 220 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 TRAF1Q13077 416 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 PADI6Q6TGC4 694 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 HOOK3Q86VS8 718 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 NEK9Q8TD19 979 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 KAT5Q92993 513 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 PRMT6Q96LA8 375 aaPredicted RBP16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 ZSWIM1Q9BR11 485 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 ARHGEF10LQ9HCE6 1279 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 RASAL2Q9UJF2 1139 aa16.35■□□□□ 0.21
LYSMD4-204ENST00000409796 MIF4GDA9UHW6 222 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 IPO5O00410 1097 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 DRD4P21917 467 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 DRG2P55039 364 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 GPC5P78333 572 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 DRP2Q13474 957 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 MYBPC2Q14324 1141 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 MESDQ14696 234 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 CLUL1Q15846 466 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 C1orf220Q5T0J3 134 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 UBAP2Q5T6F2 1119 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 TTC27Q6P3X3 843 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 NLGN1Q8N2Q7 840 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 UBL4BQ8N7F7 174 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 ZSWIM2Q8NEG5 633 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 PCDHB18PQ96TA0 734 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 JPH2Q9BR39 696 aaPredicted RBP16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 CBWD1Q9BRT8 395 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 RANBP17Q9H2T7 1088 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 CNOT10Q9H9A5 744 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 EHMT1Q9H9B1 1298 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 PKD2L1Q9P0L9 805 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 COMTP21964 271 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 RPL21P46778 160 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 DENND2CQ68D51 928 aa16.34■□□□□ 0.21
LYSMD4-204ENST00000409796 INTS8Q75QN2 995 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms