RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 CMTR2Q8IYT2 770 aaKnown RBP7.48□□□□□ -1.21
LSM5-203ENST00000409782 CCDC191Q8NCU4 936 aa7.48□□□□□ -1.21
LSM5-203ENST00000409782 GRAPLQ8TC17 118 aaPredicted RBP7.48□□□□□ -1.21
LSM5-203ENST00000409782 SSH1Q8WYL5 1049 aa7.48□□□□□ -1.21
LSM5-203ENST00000409782 IL17RAQ96F46 866 aa7.48□□□□□ -1.21
LSM5-203ENST00000409782 TCTN2Q96GX1 697 aa7.48□□□□□ -1.21
LSM5-203ENST00000409782 FAXDC2Q96IV6 333 aa7.48□□□□□ -1.21
LSM5-203ENST00000409782 BOCQ9BWV1 1114 aa7.48□□□□□ -1.21
LSM5-203ENST00000409782 TMX4Q9H1E5 349 aaPredicted RBP7.48□□□□□ -1.21
LSM5-203ENST00000409782 TRIT1Q9H3H1 467 aaKnown RBP7.48□□□□□ -1.21
LSM5-203ENST00000409782 CLEC1BQ9P126 229 aa7.48□□□□□ -1.21
LSM5-203ENST00000409782 ADGRE2Q9UHX3 823 aa7.48□□□□□ -1.21
LSM5-203ENST00000409782 MRFAP1Q9Y605 127 aa7.48□□□□□ -1.21
LSM5-203ENST00000409782 MYO1BO43795 1136 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 PCCAP05165 728 aaPredicted RBP7.47□□□□□ -1.21
LSM5-203ENST00000409782 PF4V1P10720 104 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 LCP1P13796 627 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 CD96P40200 585 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 SF3B3Q15393 1217 aaKnown RBP7.47□□□□□ -1.21
LSM5-203ENST00000409782 RTP2Q5QGT7 225 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 OLFM4Q6UX06 510 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 NFXL1Q6ZNB6 911 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 C11orf96Q7Z7L8 435 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 RASSF3Q86WH2 238 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 ABI1Q8IZP0 508 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 C2orf69Q8N8R5 385 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 USP33Q8TEY7 942 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 UBE2FQ969M7 185 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 MYD88Q99836 296 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 UBA5Q9GZZ9 404 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 IPPKQ9H8X2 491 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 VTA1Q9NP79 307 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 ZNF277Q9NRM2 450 aaPredicted RBP7.47□□□□□ -1.21
LSM5-203ENST00000409782 SEMA3GQ9NS98 782 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 CWC25Q9NXE8 425 aaPredicted RBP7.47□□□□□ -1.21
LSM5-203ENST00000409782 ZSWIM5Q9P217 1185 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 MINPP1Q9UNW1 487 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 ATP6V0A2Q9Y487 856 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 SPO11Q9Y5K1 396 aa7.47□□□□□ -1.21
LSM5-203ENST00000409782 DUOX1Q9NRD9 1551 aa7.46□□□□□ -1.21
LSM5-203ENST00000409782 NPHP3-ACAD11A0A0J9YXS1 232 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 PI4KAP2A4QPH2 592 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 MEIS1O00470 390 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 FGF10O15520 208 aaPredicted RBP7.46□□□□□ -1.22
LSM5-203ENST00000409782 TGM5O43548 720 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 BBOX1O75936 387 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 MT-CO1P00395 513 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 LTFP02788 710 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 SRGAP2CP0DJJ0 459 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 VEGFAP15692 232 aaPredicted RBP7.46□□□□□ -1.22
LSM5-203ENST00000409782 HSPA6P17066 643 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 FUT4P22083 530 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 IRAK1P51617 712 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 NEXNQ0ZGT2 675 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 FSTL1Q12841 308 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 TERF2Q15554 542 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 CYP2R1Q6VVX0 501 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 EPM2AIP1Q7L775 607 aaPredicted RBP7.46□□□□□ -1.22
LSM5-203ENST00000409782 TPH2Q8IWU9 490 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 Q8N1Y9 231 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 SYNE4Q8N205 404 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 PI4KAP1Q8N8J0 262 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 SUPT20HQ8NEM7 779 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 PJA1Q8NG27 643 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 TTC17Q96AE7 1141 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 CLIP3Q96DZ5 547 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 FAM89AQ96GI7 184 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 VPS33BQ9H267 617 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 CDIP1Q9H305 208 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 ATP13A1Q9HD20 1204 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 C14orf119Q9NWQ9 140 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 RCAN3Q9UKA8 241 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 MAP3K2Q9Y2U5 619 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 CDHR2Q9BYE9 1310 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 ZNF541Q9H0D2 1346 aa7.46□□□□□ -1.22
LSM5-203ENST00000409782 COL4A5P29400 1685 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 LTBP1Q14766 1721 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 H7C1D1 291 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 ZNF561-AS1K7EIQ3 104 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 HTR3AP46098 478 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 PCBP3P57721 371 aaKnown RBP7.45□□□□□ -1.22
LSM5-203ENST00000409782 ZP2Q05996 745 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 EXOSC9Q06265 439 aaKnown RBP7.45□□□□□ -1.22
LSM5-203ENST00000409782 LSAMPQ13449 338 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 DHX8Q14562 1220 aaKnown RBP7.45□□□□□ -1.22
LSM5-203ENST00000409782 PCBP2Q15366 365 aaKnown RBP eCLIP7.45□□□□□ -1.22
LSM5-203ENST00000409782 CRY1Q16526 586 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 HHIPL2Q6UWX4 724 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 TMPRSS7Q7RTY8 843 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 SP8Q8IXZ3 490 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 ZNF610Q8N9Z0 462 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 HSPBAP1Q96EW2 488 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 DUSP15Q9H1R2 295 aaPredicted RBP7.45□□□□□ -1.22
LSM5-203ENST00000409782 LMCD1Q9NZU5 365 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 SCN4AP35499 1836 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 RTL9Q8NET4 1388 aa7.45□□□□□ -1.22
LSM5-203ENST00000409782 H7BY64 318 aa7.44□□□□□ -1.22
LSM5-203ENST00000409782 TCERG1O14776 1098 aaKnown RBP7.44□□□□□ -1.22
LSM5-203ENST00000409782 PPIP5K2O43314 1243 aa7.44□□□□□ -1.22
LSM5-203ENST00000409782 IGKV5-2P06315 115 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms