RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 NCKAP1LP55160 1127 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 WDR5P61964 334 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 TMEM62Q0P6H9 643 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 RAB30Q15771 203 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 ZNF697Q5TEC3 545 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 ZNF658Q5TYW1 1059 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 USP38Q8NB14 1042 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 IFIH1Q9BYX4 1025 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 INO80BQ9C086 356 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 SEMA6BQ9H3T3 888 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 ST6GALNAC4Q9H4F1 302 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 MSRAQ9UJ68 235 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 PCDHB13Q9Y5F0 798 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 TRPV2Q9Y5S1 764 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 SIP14410 1827 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 TMEM265A0A087WTH1 108 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 BIN1O00499 593 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 EIF3DO15371 548 aaKnown RBP eCLIP18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 SLC16A4O15374 487 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 GHRP10912 638 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 PPP1R2P41236 205 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 PTENP60484 403 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 MORC3Q14149 939 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 LPIN1Q14693 890 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 KIZQ2M2Z5 673 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 ZSCAN23Q3MJ62 389 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 FBXO47Q5MNV8 452 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 CDCA2Q69YH5 1023 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 ZNF720Q7Z2F6 126 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 HAUS6Q7Z4H7 955 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 SRGAP1Q7Z6B7 1085 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 IFNLR1Q8IU57 520 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 KSR1Q8IVT5 923 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 APBB2Q92870 758 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 KCNN1Q92952 543 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 TIFAQ96CG3 184 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 HVCN1Q96D96 273 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 GCOM2Q9BZD3 368 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 SLC39A2Q9NP94 309 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 MTMR10Q9NXD2 777 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 TBC1D7Q9P0N9 293 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 ARHGAP28Q9P2N2 729 aa18.17■□□□□ 0.5
TSPAN4-208ENST00000409531 A0A087WZ62 844 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 GPR32O75388 356 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 UBE4BO95155 1302 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 GCNT3O95395 438 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 NMT1P30419 496 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 RABGGTBP53611 331 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 CRYBB1P53674 252 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 STK4Q13043 487 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 STIM1Q13586 685 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 PCBP1Q15365 356 aaKnown RBP eCLIP18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 HERC6Q8IVU3 1022 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 TMEM161BQ8NDZ6 487 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 FIZ1Q96SL8 496 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 FDXACB1Q9BRP7 624 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 ADAMTS10Q9H324 1103 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 TMEM134Q9H6X4 195 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 IFT122Q9HBG6 1241 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 GINS2Q9Y248 185 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 PCDHA11Q9Y5I1 949 aa18.16■□□□□ 0.5
TSPAN4-208ENST00000409531 DENND3A2RUS2 1198 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 RBAK-RBAKDNI3L0D1 243 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 K7ERI5 159 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 NLRP12P59046 1061 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 GTF2BQ00403 316 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 STRN3Q13033 797 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 COBLL1Q53SF7 1204 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 TSHZ1Q6ZSZ6 1077 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 HPS3Q969F9 1004 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 PPP1R16BQ96T49 567 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 TTYH1Q9H313 450 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 AGO3Q9H9G7 860 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 DACH1Q9UI36 760 aa18.15■□□□□ 0.5
TSPAN4-208ENST00000409531 ADGRA3Q8IWK6 1321 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 SYCE3A1L190 88 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 INO80B-WBP1J3KQ70 363 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 CCDC192P0DO97 292 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 EIF4BP23588 611 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 DEFB103AP81534 67 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 STX1AQ16623 288 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 MAPK6Q16659 721 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 ISM2Q6H9L7 571 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 MYOCDQ8IZQ8 938 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 MLKLQ8NB16 471 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 KIAA0895Q8NCT3 520 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 ZNF668Q96K58 619 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 FAM161BQ96MY7 647 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 OSMRQ99650 979 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 KIFC3Q9BVG8 833 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 ZNF576Q9H609 170 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 SLC28A3Q9HAS3 691 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 CDHR5Q9HBB8 845 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 PRMT7Q9NVM4 692 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 ANO10Q9NW15 660 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 EXOC7Q9UPT5 735 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 GDAQ9Y2T3 454 aa18.14■□□□□ 0.49
TSPAN4-208ENST00000409531 YBX2Q9Y2T7 364 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms