RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 GNA14O95837 355 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 ZNF286BP0CG31 522 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 IRX1P78414 480 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-202ENST00000409435 PRPSAP1Q14558 356 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 HDDC3Q8N4P3 179 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 SLITRK1Q96PX8 696 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 DRC3Q9H069 523 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 EPC1Q9H2F5 836 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 HPS5Q9UPZ3 1129 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 MYMKA6NI61 221 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 KLRK1P26718 216 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 HADHQ16836 314 aaKnown RBP7.82□□□□□ -1.16
SCN9A-202ENST00000409435 TDRD10Q5VZ19 366 aaKnown RBP7.82□□□□□ -1.16
SCN9A-202ENST00000409435 ARMC6Q6NXE6 501 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 EFHBQ8N7U6 833 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 RNF26Q9BY78 433 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-202ENST00000409435 TJP2Q9UDY2 1190 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 FAM205AQ6ZU69 1335 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 A0A0D9SFI3 127 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 H3BRB1 525 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 USP2O75604 605 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-202ENST00000409435 SELPP16109 830 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 RPS6P62753 249 aaKnown RBP7.82□□□□□ -1.16
SCN9A-202ENST00000409435 GPM6BQ13491 265 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 ICE2Q659A1 982 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 BTN2A1Q7KYR7 527 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 SAPCD2Q86UD0 394 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 SAMD3Q8N6K7 520 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 IFT81Q8WYA0 676 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 OSBP2Q969R2 916 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 TRIM55Q9BYV6 548 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 TUT1Q9H6E5 874 aaKnown RBP7.82□□□□□ -1.16
SCN9A-202ENST00000409435 STK39Q9UEW8 545 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 STK38LQ9Y2H1 464 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 WBP4O75554 376 aaKnown RBP7.82□□□□□ -1.16
SCN9A-202ENST00000409435 ACRP10323 421 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 BPIFB4P59827 614 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 ADCY1Q08828 1119 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 PLPP4Q5VZY2 271 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 GPRASP2Q96D09 838 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 CENPKQ9BS16 269 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 MRPL46Q9H2W6 279 aaKnown RBP7.82□□□□□ -1.16
SCN9A-202ENST00000409435 PARVGQ9HBI0 331 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 ODC1P11926 461 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 PPP1R7Q15435 360 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.82□□□□□ -1.16
SCN9A-202ENST00000409435 NFRKBQ6P4R8 1299 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 CATSPERGQ6ZRH7 1159 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 RIOX2Q8IUF8 465 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 FAM81BQ96LP2 452 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 FAM20AQ96MK3 541 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 CYP4F11Q9HBI6 524 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 TMX2Q9Y320 296 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 GIPC1O14908 333 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 CKMP06732 381 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 LIG3P49916 1009 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 TMEM132DQ14C87 1099 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 ARHGAP44Q17R89 818 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 CTXN3Q4LDR2 81 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 ZNF280DQ6N043 979 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 SCARA5Q6ZMJ2 495 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 TAAR1Q96RJ0 339 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 EHD4Q9H223 541 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 MRPS23Q9Y3D9 190 aaKnown RBP7.82□□□□□ -1.16
SCN9A-202ENST00000409435 RFX7Q2KHR2 1363 aa7.82□□□□□ -1.16
SCN9A-202ENST00000409435 MEI4A8MW99 385 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 CAND2O75155 1236 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 LAG3P18627 525 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 UBASH3AP57075 661 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 UBE2HP62256 183 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 BASP1P80723 227 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 BYSLQ13895 437 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 DCAF4L1Q3SXM0 396 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 CCDC122Q5T0U0 273 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 ZC3H14Q6PJT7 736 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 DDX42Q86XP3 938 aaKnown RBP eCLIP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 AFAP1L2Q8N4X5 818 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 RASGRP4Q8TDF6 673 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 TIFAQ96CG3 184 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 SH3GL2Q99962 352 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 NOC4LQ9BVI4 516 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 KIAA1586Q9HCI6 787 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 SETD4Q9NVD3 440 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 USP32Q8NFA0 1604 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 CXCL14O95715 111 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 LMNAP02545 664 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 RPSAP08865 295 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 CA4P22748 312 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 ANO4Q32M45 955 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 CCDC144BQ3MJ40 725 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 TNIP3Q96KP6 325 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 CSRNP2Q9H175 543 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 SCUBE2Q9NQ36 999 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 PXDNQ92626 1479 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 DDTLA6NHG4 134 aaPredicted RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 SGSM2O43147 1006 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 XRCC5P13010 732 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 UBXN2BQ14CS0 331 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 CEP55Q53EZ4 464 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 ARMC2Q8NEN0 867 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms