RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 PSMD2Q13200 908 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 AMHR2Q16671 573 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 SRGAP1Q7Z6B7 1085 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 SYCP3Q8IZU3 236 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 BADQ92934 168 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 ZBTB45Q96K62 511 aaPredicted RBP15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 STRA6Q9BX79 667 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 C2orf40Q9H1Z8 148 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 PRKAG2Q9UGJ0 569 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 PADI3Q9ULW8 664 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 CTNND2Q9UQB3 1225 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 ZMYM2Q9UBW7 1377 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 TRIM49BA6NDI0 452 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 ANKRD63C9JTQ0 380 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 TSPAN1O60635 241 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 CAND2O75155 1236 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 ARF4P18085 180 aaPredicted RBP15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 EFNA5P52803 228 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 NLRP12P59046 1061 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 TYRO3Q06418 890 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 PAK2Q13177 524 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 PRPF4BQ13523 1007 aaKnown RBP15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 TSHZ1Q6ZSZ6 1077 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 C11orf57Q6ZUT1 292 aaPredicted RBP15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 ZBTB33Q86T24 672 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 IFNLR1Q8IU57 520 aaPredicted RBP15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 MYOCDQ8IZQ8 938 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 EEF2KMTQ96G04 330 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 FZD8Q9H461 694 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 TMEM134Q9H6X4 195 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 ANKFY1Q9P2R3 1169 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 PIN4Q9Y237 131 aaKnown RBP15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
CHRNA1-204ENST00000409323 LTBP2Q14767 1821 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 PPP1R3GB7ZBB8 358 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 TULP1O00294 542 aaPredicted RBP15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 HNRNPDLO14979 420 aaKnown RBP15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 CLIC2O15247 247 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 MGEA5O60502 916 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 SFPQP23246 707 aaKnown RBP eCLIP15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 PMS1P54277 932 aaKnown RBP15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 CDC42EP1Q00587 391 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 POU5F1BQ06416 359 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 EEF1DP3Q658K8 133 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 SLC39A4Q6P5W5 647 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 DBF4BQ8NFT6 615 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 ZNF507Q8TCN5 953 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 NOC3LQ8WTT2 800 aaKnown RBP15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 ACCSQ96QU6 501 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 NFKBIZQ9BYH8 718 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 IFIH1Q9BYX4 1025 aaKnown RBP15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 DNAJC25Q9H1X3 360 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 ERVK-5Q9HDB9 667 aa15.48■□□□□ 0.07
CHRNA1-204ENST00000409323 EIF3DO15371 548 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 RPLP2P05387 115 aaKnown RBP15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 HOXA11P31270 313 aaPredicted RBP15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 MATR3P43243 847 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 LIG4P49917 911 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 SEZ6Q53EL9 994 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 MAP4K3Q8IVH8 894 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 ADSSL1Q8N142 457 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 TRIML1Q8N9V2 468 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 ZSWIM2Q8NEG5 633 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 VWCEQ96DN2 955 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 HAPLN2Q9GZV7 340 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 TMX1Q9H3N1 280 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 SEMA6BQ9H3T3 888 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 ST6GALNAC4Q9H4F1 302 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 PCIF1Q9H4Z3 704 aa15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 PRMT7Q9NVM4 692 aaPredicted RBP15.47■□□□□ 0.07
CHRNA1-204ENST00000409323 H0YCG3 227 aa15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 ACKR2O00590 384 aa15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 TGFB1I1O43294 461 aa15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 STX1AQ16623 288 aa15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 KNOP1Q1ED39 458 aaKnown RBP15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 ATF7IP2Q5U623 682 aa15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 STXBP4Q6ZWJ1 553 aa15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 NELFBQ8WX92 580 aa15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 ACO2Q99798 780 aaKnown RBP15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 FUCA2Q9BTY2 467 aa15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 EIF2AQ9BY44 585 aaKnown RBP15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 MRPL4Q9BYD3 311 aaKnown RBP15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 PDZD7Q9H5P4 517 aa15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 AGPAT5Q9NUQ2 364 aa15.46■□□□□ 0.07
CHRNA1-204ENST00000409323 CNTNAP2Q9UHC6 1331 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 GPR182O15218 404 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 OSTNP61366 133 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 ANO6Q4KMQ2 910 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 MFSD5Q6N075 450 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 GUF1Q8N442 669 aaKnown RBP15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 SLC17A8Q8NDX2 589 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 CBWD1Q9BRT8 395 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 TCHPQ9BT92 498 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 KCTD10Q9H3F6 313 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 KCNG1Q9UIX4 513 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 HES2Q9Y543 173 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 GOLGA8IPA6NC78 632 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 GOLGA8JA6NMD2 632 aa15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 LETM1O95202 739 aaPredicted RBP15.45■□□□□ 0.06
CHRNA1-204ENST00000409323 NPTXRO95502 500 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms