RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 RWDD3Q9Y3V2 267 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 USP34Q70CQ2 3546 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 PLXNA4Q9HCM2 1894 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 SRGAP2CP0DJJ0 459 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 MCM7P33993 719 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 POLGP54098 1239 aaPredicted RBP10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 MTA1Q13330 715 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 AAK1Q2M2I8 961 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 SPOUT1Q5T280 376 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 ZNF598Q86UK7 904 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 C4orf19Q8IY42 314 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 SLFN12Q8IYM2 578 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 PDCL2Q8N4E4 241 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 HELQQ8TDG4 1101 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 C8orf76Q96K31 380 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 GCOM2Q9BZD3 368 aaPredicted RBP10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 XPNPEP1Q9NQW7 623 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 CLDND1Q9NY35 253 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 PCDHA12Q9UN75 941 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 PIN4Q9Y237 131 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 COL4A3BPQ9Y5P4 624 aa10.76□□□□□ -0.69
NIF3L1-202ENST00000409020 A0A0U1RQF3 1178 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 TBX10O75333 385 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 SLFN14P0C7P3 912 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 DNM2P50570 870 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 ERVFC1P60507 584 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 LAMTOR4Q0VGL1 99 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 EMC2Q15006 297 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 ZNF174Q15697 407 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 CTC1Q2NKJ3 1217 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 LEXMQ3ZCV2 418 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 XKR9Q5GH70 373 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 ODR4Q5SWX8 454 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 SWT1Q5T5J6 900 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 PTCRAQ6ISU1 281 aaPredicted RBP10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 RBM23Q86U06 439 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 COLGALT1Q8NBJ5 622 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 FBXO18Q8NFZ0 1043 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 PIGOQ8TEQ8 1089 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 SLC7A3Q8WY07 619 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 P2RX5Q93086 422 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 PABPC5Q96DU9 382 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 NAP1L4Q99733 375 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 ELAC1Q9H777 363 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 ZSWIM4Q9H7M6 989 aa10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 UPF2Q9HAU5 1272 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-202ENST00000409020 PPP1R12AO14974 1030 aaPredicted RBP10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 TRAK2O60296 914 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 B4GALT3O60512 393 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 FGF18O76093 207 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 BAG4O95429 457 aaKnown RBP10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 SPATA31C1P0DKV0 1188 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 PHKA2P46019 1235 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 AFF1P51825 1210 aaKnown RBP10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 ZNF410Q86VK4 478 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 ASAP3Q8TDY4 903 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 LLPHQ9BRT6 129 aaKnown RBP10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 TMEM117Q9H0C3 514 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 LMAN2LQ9H0V9 348 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 WDR87Q6ZQQ6 2873 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 ARID2Q68CP9 1835 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 VPS13AQ96RL7 3174 aa10.74□□□□□ -0.69
NIF3L1-202ENST00000409020 GRXCR2A6NFK2 248 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 NT5C1B-RDH14C9J2C7 533 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 PER2O15055 1255 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 MED24O75448 989 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 GLP2RO95838 553 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 SFPQP23246 707 aaKnown RBP eCLIP10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 HOXA11P31270 313 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 TECP42680 631 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 NRIP1P48552 1158 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 TWF2Q6IBS0 349 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 CATSPER4Q7RTX7 472 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 FERMT3Q86UX7 667 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 TMEM173Q86WV6 379 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 VN1R2Q8NFZ6 395 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 PSPC1Q8WXF1 523 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 PAIP2Q9BPZ3 127 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 GPRC5CQ9NQ84 441 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 WDR70Q9NW82 654 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 KLHL33A6NCF5 533 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 RFC5P40937 340 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 RARRES1P49788 294 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 TOB1P50616 345 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 SAFBQ15424 915 aaKnown RBP eCLIP10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 ECM1Q16610 540 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 NAALADL2Q58DX5 795 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 UBXN11Q5T124 520 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 POTEGQ6S5H5 508 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 MAEAQ7L5Y9 396 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 CATSPER3Q86XQ3 398 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 NOSTRINQ8IVI9 506 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 THNSL1Q8IYQ7 743 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 ZNF710Q8N1W2 664 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 LRRC43Q8N309 656 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 C4orf32Q8N8J7 132 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 FAM184AQ8NB25 1140 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 RNF149Q8NC42 400 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 ZBTB9Q96C00 473 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 ZSCAN31Q96LW9 406 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms