RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TOB1P50616 345 aaPredicted RBP21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 MBTD1Q05BQ5 628 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 TFDP1Q14186 410 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 TMC7Q7Z402 723 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 ADHFE1Q8IWW8 467 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 SMRP1Q8NCR6 262 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 PGBD4Q96DM1 585 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 CPB2Q96IY4 423 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 POLR3CQ9BUI4 534 aaPredicted RBP21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 EIF2AQ9BY44 585 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 NGRNQ9NPE2 291 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 DNAJB4Q9UDY4 337 aa21.44■■□□□ 1.02
SMARCB1-204ENST00000407422 TRAPPC10P48553 1259 aa21.43■■□□□ 1.02
SMARCB1-204ENST00000407422 RNASELQ05823 741 aaKnown RBP21.43■■□□□ 1.02
SMARCB1-204ENST00000407422 POU5F1BQ06416 359 aa21.43■■□□□ 1.02
SMARCB1-204ENST00000407422 COASYQ13057 564 aa21.43■■□□□ 1.02
SMARCB1-204ENST00000407422 ZNF280BQ86YH2 543 aa21.43■■□□□ 1.02
SMARCB1-204ENST00000407422 IFNLR1Q8IU57 520 aaPredicted RBP21.43■■□□□ 1.02
SMARCB1-204ENST00000407422 SMG8Q8ND04 991 aaKnown RBP21.43■■□□□ 1.02
SMARCB1-204ENST00000407422 CDCA3Q99618 268 aaPredicted RBP21.43■■□□□ 1.02
SMARCB1-204ENST00000407422 GBP3Q9H0R5 595 aa21.43■■□□□ 1.02
SMARCB1-204ENST00000407422 C19orf67A6NJJ6 358 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 PI4K2BG5E9Z4 385 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 ST18O60284 1047 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 COL9A1P20849 921 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 RPA1P27694 616 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 AMHR2Q16671 573 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 BCL7CQ8WUZ0 217 aaPredicted RBP21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 RSPH1Q8WYR4 309 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 TMEM169Q96HH4 297 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 NACC1Q96RE7 527 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 RSAD1Q9HA92 442 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 RAPGEFL1Q9UHV5 662 aa21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 DBR1Q9UK59 544 aaKnown RBP21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 NOL7Q9UMY1 257 aaKnown RBP21.42■■□□□ 1.02
SMARCB1-204ENST00000407422 DDHD2O94830 711 aa21.41■■□□□ 1.02
SMARCB1-204ENST00000407422 GALTP07902 379 aa21.41■■□□□ 1.02
SMARCB1-204ENST00000407422 KCNC3Q14003 757 aa21.41■■□□□ 1.02
SMARCB1-204ENST00000407422 ECM1Q16610 540 aa21.41■■□□□ 1.02
SMARCB1-204ENST00000407422 ERMNQ8TAM6 284 aa21.41■■□□□ 1.02
SMARCB1-204ENST00000407422 TMX3Q96JJ7 454 aa21.41■■□□□ 1.02
SMARCB1-204ENST00000407422 RNF39Q9H2S5 420 aa21.41■■□□□ 1.02
SMARCB1-204ENST00000407422 C11orf16Q9NQ32 467 aa21.41■■□□□ 1.02
SMARCB1-204ENST00000407422 IPPQ9Y573 584 aa21.41■■□□□ 1.02
SMARCB1-204ENST00000407422 PCDHB6Q9Y5E3 794 aa21.41■■□□□ 1.02
SMARCB1-204ENST00000407422 B4GALT5O43286 388 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 ARF4P18085 180 aaPredicted RBP21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 NCLP19338 710 aaKnown RBP21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 AXLP30530 894 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 SLC11A1P49279 550 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 PCBP1Q15365 356 aaKnown RBP eCLIP21.4■■□□□ 1.023e-10■■■□□ 18.2
SMARCB1-204ENST00000407422 LLGL2Q6P1M3 1020 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 NOTUMQ6P988 496 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 MRPL43Q8N983 215 aaKnown RBP21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 IGSF21Q96ID5 467 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 NFKBIZQ9BYH8 718 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 USP15Q9Y4E8 981 aaPredicted RBP21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 HES2Q9Y543 173 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 CNTNAP2Q9UHC6 1331 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 FAM86C2PA6NEL3 165 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 C2orf71A6NGG8 1288 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 POMCP01189 267 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 FXR2P51116 673 aaKnown RBP eCLIP21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 PTGDRQ13258 359 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 SMC1AQ14683 1233 aaKnown RBP21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 CDR2LQ86X02 465 aaPredicted RBP21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 VPS52Q8N1B4 723 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 URGCPQ8TCY9 931 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 AUTS2Q8WXX7 1259 aa21.4■■□□□ 1.02
SMARCB1-204ENST00000407422 TDRD15B5MCY1 1934 aaKnown RBP21.39■■□□□ 1.01
SMARCB1-204ENST00000407422 LRRIQ4A6NIV6 560 aa21.39■■□□□ 1.01
SMARCB1-204ENST00000407422 ITGA4P13612 1032 aa21.39■■□□□ 1.01
SMARCB1-204ENST00000407422 PADI6Q6TGC4 694 aa21.39■■□□□ 1.01
SMARCB1-204ENST00000407422 TMEM184AQ6ZMB5 413 aa21.39■■□□□ 1.01
SMARCB1-204ENST00000407422 MCPH1Q8NEM0 835 aa21.39■■□□□ 1.01
SMARCB1-204ENST00000407422 LRFN3Q9BTN0 628 aa21.39■■□□□ 1.01
SMARCB1-204ENST00000407422 VN1R3Q9BXE9 311 aa21.39■■□□□ 1.01
SMARCB1-204ENST00000407422 CSRNP2Q9H175 543 aa21.39■■□□□ 1.01
SMARCB1-204ENST00000407422 FSD2A1L4K1 749 aa21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 CXCL14O95715 111 aa21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 CA8P35219 290 aa21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 CCT6AP40227 531 aaKnown RBP21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 NCBP1Q09161 790 aaKnown RBP21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 DDX53Q86TM3 631 aaKnown RBP21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 BSNDQ8WZ55 320 aa21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 CCDC51Q96ER9 411 aa21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 ZBP1Q9H171 429 aa21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 UPF2Q9HAU5 1272 aaKnown RBP21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 LRWD1Q9UFC0 647 aa21.38■■□□□ 1.01
SMARCB1-204ENST00000407422 ARHGEF35A5YM69 484 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 TMEM31Q5JXX7 168 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 HAUS3Q68CZ6 603 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 MCTP1Q6DN14 999 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 ANKRD54Q6NXT1 300 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 CNNM3Q8NE01 707 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 GAD1Q99259 594 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 POP1Q99575 1024 aaKnown RBP21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 APOL6Q9BWW8 343 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 APOL5Q9BWW9 433 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 NXF3Q9H4D5 531 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms