RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 MARCH6O60337 910 aa17.63■□□□□ 0.41
CDK11B-204ENST00000407249 PON1P27169 355 aa17.63■□□□□ 0.41
CDK11B-204ENST00000407249 DHX9Q08211 1270 aaKnown RBP17.63■□□□□ 0.41
CDK11B-204ENST00000407249 TMEM62Q0P6H9 643 aa17.63■□□□□ 0.41
CDK11B-204ENST00000407249 E2F5Q15329 346 aa17.63■□□□□ 0.41
CDK11B-204ENST00000407249 TTBK2Q6IQ55 1244 aa17.63■□□□□ 0.41
CDK11B-204ENST00000407249 MTHFD1LQ6UB35 978 aa17.63■□□□□ 0.41
CDK11B-204ENST00000407249 TDRD3Q9H7E2 651 aaKnown RBP17.63■□□□□ 0.41
CDK11B-204ENST00000407249 PCDHAC2Q9Y5I4 1007 aa17.63■□□□□ 0.41
CDK11B-204ENST00000407249 ATP8B3O60423 1300 aa17.62■□□□□ 0.41
CDK11B-204ENST00000407249 ANXA13P27216 316 aa17.62■□□□□ 0.41
CDK11B-204ENST00000407249 EXOC3L4Q17RC7 722 aa17.62■□□□□ 0.41
CDK11B-204ENST00000407249 KRT71Q3SY84 523 aa17.62■□□□□ 0.41
CDK11B-204ENST00000407249 FRMD5Q7Z6J6 570 aa17.62■□□□□ 0.41
CDK11B-204ENST00000407249 ARMCX3Q9UH62 379 aaPredicted RBP17.62■□□□□ 0.41
CDK11B-204ENST00000407249 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.62■□□□□ 0.41
CDK11B-204ENST00000407249 A0A0A6YYK5 440 aaPredicted RBP17.62■□□□□ 0.41
CDK11B-204ENST00000407249 USP17L10C9JJH3 530 aa17.62■□□□□ 0.41
CDK11B-204ENST00000407249 KRT38O76015 456 aa17.62■□□□□ 0.41
CDK11B-204ENST00000407249 AFPP02771 609 aaKnown RBP17.62■□□□□ 0.41
CDK11B-204ENST00000407249 VIL1P09327 827 aaKnown RBP17.62■□□□□ 0.41
CDK11B-204ENST00000407249 NAT2P11245 290 aa17.62■□□□□ 0.41
CDK11B-204ENST00000407249 STIP1P31948 543 aaKnown RBP17.62■□□□□ 0.41
CDK11B-204ENST00000407249 LACTB2Q53H82 288 aaPredicted RBP17.62■□□□□ 0.41
CDK11B-204ENST00000407249 GKAP1Q5VSY0 366 aaPredicted RBP17.62■□□□□ 0.41
CDK11B-204ENST00000407249 KCTD1Q719H9 257 aa17.62■□□□□ 0.41
CDK11B-204ENST00000407249 NT5DC3Q86UY8 548 aa17.62■□□□□ 0.41
CDK11B-204ENST00000407249 POTEB3A0JP26 581 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 POTECB2RU33 542 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 PPP1R11O60927 126 aaPredicted RBP17.61■□□□□ 0.41
CDK11B-204ENST00000407249 H2AFZP0C0S5 128 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 POU5F1Q01860 360 aaKnown RBP17.61■□□□□ 0.41
CDK11B-204ENST00000407249 FKBP1CQ5VVH2 108 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 POTEBQ6S5H4 581 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 H2AFVQ71UI9 128 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 HES6Q96HZ4 224 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 CELF4Q9BZC1 486 aaKnown RBP17.61■□□□□ 0.41
CDK11B-204ENST00000407249 PSTPIP2Q9H939 334 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 LRRC4CQ9HCJ2 640 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 FAM114A2Q9NRY5 505 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 TRAF3IP3Q9Y228 551 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 UTP11Q9Y3A2 253 aaKnown RBP17.61■□□□□ 0.41
CDK11B-204ENST00000407249 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 PHF20L1A8MW92 1017 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 RPL13P26373 211 aaKnown RBP17.61■□□□□ 0.41
CDK11B-204ENST00000407249 SCTRP47872 440 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 CASP5P51878 434 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 SNCBQ16143 134 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 ARSHQ5FYA8 562 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 DAAM2Q86T65 1068 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 CEP57Q86XR8 500 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 SYCE1Q8N0S2 351 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 GORASP1Q9BQQ3 440 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 RETREG1Q9H6L5 497 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 BARX2Q9UMQ3 279 aaPredicted RBP17.61■□□□□ 0.41
CDK11B-204ENST00000407249 ATP8A1Q9Y2Q0 1164 aa17.61■□□□□ 0.41
CDK11B-204ENST00000407249 FERP16591 822 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 NPEPPSP55786 919 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 AP3B2Q13367 1082 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 CCDC50Q8IVM0 306 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 CCT6BQ92526 530 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 P3H4Q92791 437 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 TLCD1Q96CP7 247 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 PRMT6Q96LA8 375 aaPredicted RBP17.6■□□□□ 0.41
CDK11B-204ENST00000407249 GMLQ99445 158 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 CNOT10Q9H9A5 744 aaKnown RBP17.6■□□□□ 0.41
CDK11B-204ENST00000407249 PAPOLBQ9NRJ5 636 aaKnown RBP17.6■□□□□ 0.41
CDK11B-204ENST00000407249 HAUS2Q9NVX0 235 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 INTUQ9ULD6 942 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 ATF5Q9Y2D1 282 aaPredicted RBP17.6■□□□□ 0.41
CDK11B-204ENST00000407249 PITPNM2Q9BZ72 1349 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 TIMM44O43615 452 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 XRCC5P13010 732 aaKnown RBP17.6■□□□□ 0.41
CDK11B-204ENST00000407249 DRD4P21917 467 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 QRICH1Q2TAL8 776 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 MOXD1Q6UVY6 613 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 CPLX4Q7Z7G2 160 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 FAM228AQ86W67 206 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 LARGE2Q8N3Y3 721 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 ZFAND2BQ8WV99 257 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 FAM151AQ8WW52 585 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 SLC35B4Q969S0 331 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 CSRNP1Q96S65 589 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 TXLNGYQ9BZA5 131 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 IRF2BPLQ9H1B7 796 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 DPH5Q9H2P9 285 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 ZHX3Q9H4I2 956 aa17.6■□□□□ 0.41
CDK11B-204ENST00000407249 TTC7AQ9ULT0 858 aaPredicted RBP17.6■□□□□ 0.41
CDK11B-204ENST00000407249 DDX3XO00571 662 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDK11B-204ENST00000407249 IBSPP21815 317 aaPredicted RBP17.59■□□□□ 0.41
CDK11B-204ENST00000407249 SLC16A2P36021 539 aa17.59■□□□□ 0.41
CDK11B-204ENST00000407249 SLC12A3P55017 1021 aa17.59■□□□□ 0.41
CDK11B-204ENST00000407249 EIF3BP55884 814 aaKnown RBP17.59■□□□□ 0.41
CDK11B-204ENST00000407249 JAM2P57087 298 aa17.59■□□□□ 0.41
CDK11B-204ENST00000407249 XRCC4Q13426 336 aa17.59■□□□□ 0.41
CDK11B-204ENST00000407249 EPHA7Q15375 998 aa17.59■□□□□ 0.41
CDK11B-204ENST00000407249 VPS36Q86VN1 386 aa17.59■□□□□ 0.41
CDK11B-204ENST00000407249 MTMR14Q8NCE2 650 aa17.59■□□□□ 0.41
CDK11B-204ENST00000407249 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms