RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 TMEM31Q5JXX7 168 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 TTC38Q5R3I4 469 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 POTEGQ6S5H5 508 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 TMC7Q7Z402 723 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 MRPL10Q7Z7H8 261 aaKnown RBP17.09■□□□□ 0.33
TPM1-207ENST00000403994 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 BCL7CQ8WUZ0 217 aaPredicted RBP17.09■□□□□ 0.33
TPM1-207ENST00000403994 PGBD4Q96DM1 585 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 TMEM169Q96HH4 297 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 LRFN3Q9BTN0 628 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 POLR3FQ9H1D9 316 aaPredicted RBP17.09■□□□□ 0.33
TPM1-207ENST00000403994 RSAD1Q9HA92 442 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 TUFT1Q9NNX1 390 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 CNTNAP2Q9UHC6 1331 aa17.09■□□□□ 0.33
TPM1-207ENST00000403994 MUC6Q6W4X9 2439 aa17.08■□□□□ 0.33
TPM1-207ENST00000403994 A0A087WWV3 80 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 INO80B-WBP1J3KQ70 363 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 SRGAP2BP0DMP2 458 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 GLRA2P23416 452 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 TECP42680 631 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 RNASELQ05823 741 aaKnown RBP17.08■□□□□ 0.32
TPM1-207ENST00000403994 POU5F1BQ06416 359 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 GNL2Q13823 731 aaKnown RBP17.08■□□□□ 0.32
TPM1-207ENST00000403994 NBR1Q14596 966 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 RABEP1Q15276 862 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 ZNF174Q15697 407 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 AMHR2Q16671 573 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 NOTUMQ6P988 496 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 CATSPER3Q86XQ3 398 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 SMG8Q8ND04 991 aaKnown RBP17.08■□□□□ 0.32
TPM1-207ENST00000403994 URGCPQ8TCY9 931 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 CCDC51Q96ER9 411 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 POLR3CQ9BUI4 534 aaPredicted RBP17.08■□□□□ 0.32
TPM1-207ENST00000403994 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
TPM1-207ENST00000403994 NFKBIZQ9BYH8 718 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 GBP3Q9H0R5 595 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 ZBP1Q9H171 429 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 NRDE2Q9H7Z3 1164 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 DNAJB4Q9UDY4 337 aa17.08■□□□□ 0.32
TPM1-207ENST00000403994 CARNS1A5YM72 827 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 C2orf71A6NGG8 1288 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 DCXO43602 365 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 GPR37L1O60883 481 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 NCLP19338 710 aaKnown RBP17.07■□□□□ 0.32
TPM1-207ENST00000403994 AXLP30530 894 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 TRAPPC10P48553 1259 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 SLC11A1P49279 550 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 AFF1P51825 1210 aaKnown RBP17.07■□□□□ 0.32
TPM1-207ENST00000403994 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 TMEM184AQ6ZMB5 413 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 ZNF280BQ86YH2 543 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 ERMNQ8TAM6 284 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 IGSF21Q96ID5 467 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 CPB2Q96IY4 423 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 GPRC5CQ9NQ84 441 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 DBR1Q9UK59 544 aaKnown RBP17.07■□□□□ 0.32
TPM1-207ENST00000403994 IPPQ9Y573 584 aa17.07■□□□□ 0.32
TPM1-207ENST00000403994 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
TPM1-207ENST00000403994 B4GALT5O43286 388 aa17.06■□□□□ 0.32
TPM1-207ENST00000403994 GALTP07902 379 aa17.06■□□□□ 0.32
TPM1-207ENST00000403994 XRCC6P12956 609 aaKnown RBP eCLIP17.06■□□□□ 0.32
TPM1-207ENST00000403994 ALADP13716 330 aa17.06■□□□□ 0.32
TPM1-207ENST00000403994 U2AF2P26368 475 aaKnown RBP eCLIP17.06■□□□□ 0.324e-8■■■■■ 38.8
TPM1-207ENST00000403994 RPA1P27694 616 aa17.06■□□□□ 0.32
TPM1-207ENST00000403994 ANKRD54Q6NXT1 300 aa17.06■□□□□ 0.32
TPM1-207ENST00000403994 VPS52Q8N1B4 723 aa17.06■□□□□ 0.32
TPM1-207ENST00000403994 MRPL43Q8N983 215 aaKnown RBP17.06■□□□□ 0.32
TPM1-207ENST00000403994 MCPH1Q8NEM0 835 aa17.06■□□□□ 0.32
TPM1-207ENST00000403994 SUSD6Q92537 303 aa17.06■□□□□ 0.32
TPM1-207ENST00000403994 VN1R3Q9BXE9 311 aa17.06■□□□□ 0.32
TPM1-207ENST00000403994 NOL7Q9UMY1 257 aaKnown RBP17.06■□□□□ 0.32
TPM1-207ENST00000403994 DENND4AQ7Z401 1863 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 LRRIQ4A6NIV6 560 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 INPPL1O15357 1258 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 ARF4P18085 180 aaPredicted RBP17.05■□□□□ 0.32
TPM1-207ENST00000403994 CA8P35219 290 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 FXR2P51116 673 aaKnown RBP eCLIP17.05■□□□□ 0.32
TPM1-207ENST00000403994 HAUS3Q68CZ6 603 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 CDCA2Q69YH5 1023 aaPredicted RBP17.05■□□□□ 0.32
TPM1-207ENST00000403994 SYCE2Q6PIF2 218 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 DDX53Q86TM3 631 aaKnown RBP17.05■□□□□ 0.32
TPM1-207ENST00000403994 C4orf32Q8N8J7 132 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 CNNM3Q8NE01 707 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 AUTS2Q8WXX7 1259 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 CSRNP2Q9H175 543 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 NXF3Q9H4D5 531 aaKnown RBP17.05■□□□□ 0.32
TPM1-207ENST00000403994 HES2Q9Y543 173 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 HCFC2Q9Y5Z7 792 aa17.05■□□□□ 0.32
TPM1-207ENST00000403994 ARL5CA6NH57 179 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 LOC730098B7Z3J9 87 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 ST18O60284 1047 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 DDHD2O94830 711 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
TPM1-207ENST00000403994 POMCP01189 267 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 ITGA4P13612 1032 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 MLH1P40692 756 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 TOB1P50616 345 aaPredicted RBP17.04■□□□□ 0.32
TPM1-207ENST00000403994 MAEAQ7L5Y9 396 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
TPM1-207ENST00000403994 S1PR5Q9H228 398 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms