RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 VCANP13611 3396 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 DNAJA1P31689 397 aaKnown RBP7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 CDK7P50613 346 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 OAZ1P54368 228 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 GJA9P57773 515 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 CCDC144BQ3MJ40 725 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 ARSHQ5FYA8 562 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 LCE3BQ5TA77 95 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 CCSAPQ6IQ19 270 aaPredicted RBP7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 CCDC81Q6ZN84 652 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 FAM126BQ8IXS8 530 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 RPUSD2Q8IZ73 545 aaKnown RBP7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 CHST13Q8NET6 341 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 REPS2Q8NFH8 660 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 HERVK_113Q902F9 699 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 AP5M1Q9H0R1 490 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 UPF3AQ9H1J1 476 aaKnown RBP7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 HIPK3Q9H422 1215 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 CHMP4BQ9H444 224 aaKnown RBP7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 IL23AQ9NPF7 189 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 PCMTD2Q9NV79 361 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 SYNPO2Q9UMS6 1093 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 ZBED9Q6R2W3 1325 aa7.99□□□□□ -1.13
CEACAM1-208ENST00000403461 DNAJC25-GNG10A0A024R161 153 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 CYP2D7A0A087X1C5 515 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 MYADML2A6NDP7 307 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 ASB14A6NK59 587 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 GRXCR1A8MXD5 290 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 F5H6K3 240 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 NDUFB10O96000 172 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 PLA2G5P39877 138 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 GIPRP48546 466 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 TNFAIP2Q03169 654 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 KLRC3Q07444 240 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 IKQ13123 557 aaPredicted RBP7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 ARMCX2Q7L311 632 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 NLRC3Q7RTR2 1065 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 RPAP2Q8IXW5 612 aaPredicted RBP7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 PHACTR4Q8IZ21 702 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 ZNF444Q8N0Y2 327 aaPredicted RBP7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 OR6P1Q8NGX9 317 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 RIN3Q8TB24 985 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 CCDC74BQ96LY2 380 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 NUP88Q99567 741 aaPredicted RBP7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 HAUS7Q99871 368 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 NKX2-4Q9H2Z4 354 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 BOLA2Q9H3K6 86 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 NYAP2Q9P242 653 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 CLIP2Q9UDT6 1046 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 FEM1BQ9UK73 627 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 CEP131Q9UPN4 1083 aa7.98□□□□□ -1.13
CEACAM1-208ENST00000403461 SPTBN5Q9NRC6 3674 aaKnown RBP7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 LTBP2Q14767 1821 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 PRR19A6NJB7 356 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 RGS13O14921 159 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 SLC3A2P08195 630 aaKnown RBP7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 PFKMP08237 780 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 FGRP09769 529 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 SUPT20HL2P0C7V6 817 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 NME1P15531 152 aaKnown RBP7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 ATP5JP18859 108 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 CYP2C18P33260 490 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 TDO2P48775 406 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 ITGA7Q13683 1181 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 FSCN1Q16658 493 aaKnown RBP7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 ZNF746Q6NUN9 644 aaPredicted RBP7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 GIMAP6Q6P9H5 292 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 CTR9Q6PD62 1173 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 CXCL17Q6UXB2 119 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 C16orf59Q7L2K0 433 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 FAM214BQ7L5A3 538 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 OTOP2Q7RTS6 562 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 TLK2Q86UE8 772 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 CDH24Q86UP0 819 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 DNAJB8Q8NHS0 232 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 PPP1R13LQ8WUF5 828 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 SHDQ96IW2 340 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 TM9SF2Q99805 663 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 KRTAP4-12Q9BQ66 201 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 ACAD9Q9H845 621 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 SLC38A10Q9HBR0 1119 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 RAVER2Q9HCJ3 691 aaKnown RBP7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 HOMER2Q9NSB8 354 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 GTF2IRD1Q9UHL9 959 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 RIPK3Q9Y572 518 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 SLC4A7Q9Y6M7 1214 aa7.97□□□□□ -1.13
CEACAM1-208ENST00000403461 TNFRSF10CO14798 259 aa7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 TTLL1O95922 423 aa7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 SSBP05455 408 aaKnown RBP eCLIP7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 ACTN1P12814 892 aa7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 ATP2A2P16615 1042 aaKnown RBP7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 GNAT2P19087 354 aa7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 GBP1P32455 592 aa7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 CCNFP41002 786 aa7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 STAT2P52630 851 aa7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 TKFCQ3LXA3 575 aa7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 SBK1Q52WX2 424 aa7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 BRDTQ58F21 947 aaPredicted RBP7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 FAM160B2Q86V87 743 aa7.96□□□□□ -1.14
CEACAM1-208ENST00000403461 LSRQ86X29 649 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms