RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 SNRNP35Q16560 246 aaKnown RBP19.38■□□□□ 0.69
CHTOP-205ENST00000403433 SWSAP1Q6NVH7 229 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 SLFN11Q7Z7L1 901 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 DAAM2Q86T65 1068 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 ARHGEF19Q8IW93 802 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 ZSWIM2Q8NEG5 633 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 MCPH1Q8NEM0 835 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 PLEKHO2Q8TD55 490 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 RFFLQ8WZ73 363 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 GDAP1L1Q96MZ0 367 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 HINFPQ9BQA5 517 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 AFG3L2Q9Y4W6 797 aa19.38■□□□□ 0.69
CHTOP-205ENST00000403433 PMM2O15305 246 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 EPHB4P54760 987 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 PRKCEQ02156 737 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 MIS18BP1Q6P0N0 1132 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 IFT20Q8IY31 132 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 USP38Q8NB14 1042 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 BSNDQ8WZ55 320 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 ANKRD63C9JTQ0 380 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 DGAT1O75907 488 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 RNASE9P60153 205 aaKnown RBP19.37■□□□□ 0.69
CHTOP-205ENST00000403433 ACTR2P61160 394 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 CBWD2Q8IUF1 395 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 GPC2Q8N158 579 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 ZBTB9Q96C00 473 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 SAAL1Q96ER3 474 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 AGPAT1Q99943 283 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 TMEM117Q9H0C3 514 aa19.37■□□□□ 0.69
CHTOP-205ENST00000403433 SUCLA2Q9P2R7 463 aaPredicted RBP19.37■□□□□ 0.69
CHTOP-205ENST00000403433 SPATA31C2B4DYI2 1134 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 TULP1O00294 542 aaPredicted RBP19.36■□□□□ 0.69
CHTOP-205ENST00000403433 CEP104O60308 925 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 STBD1O95210 358 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 ABCB4P21439 1286 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 CNGA1P29973 690 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 ADSSP30520 456 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 CYP2C19P33261 490 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 PRKG1Q13976 671 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 PTPROQ16827 1216 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 SND1Q7KZF4 910 aaKnown RBP eCLIP19.36■□□□□ 0.69
CHTOP-205ENST00000403433 CCDC60Q8IWA6 550 aaPredicted RBP19.36■□□□□ 0.69
CHTOP-205ENST00000403433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.36■□□□□ 0.69
CHTOP-205ENST00000403433 ACTRT1Q8TDG2 376 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 KRT12Q99456 494 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 NTPCRQ9BSD7 190 aaKnown RBP19.36■□□□□ 0.69
CHTOP-205ENST00000403433 ATP6V0A4Q9HBG4 840 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.36■□□□□ 0.69
CHTOP-205ENST00000403433 FAN1Q9Y2M0 1017 aa19.36■□□□□ 0.69
CHTOP-205ENST00000403433 DICER1Q9UPY3 1922 aaKnown RBP19.36■□□□□ 0.69
CHTOP-205ENST00000403433 MYH9P35579 1960 aaKnown RBP19.36■□□□□ 0.69
CHTOP-205ENST00000403433 RTP1P59025 263 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 EMBQ6PCB8 327 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 USP37Q86T82 979 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 SLC35G2Q8TBE7 412 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 EXOC4Q96A65 974 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 CCDC127Q96BQ5 260 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 IFT74Q96LB3 600 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 CYP26B1Q9NR63 512 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 USP20Q9Y2K6 914 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 STXBP5LQ9Y2K9 1186 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 IGSF9BQ9UPX0 1349 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 PGRMC1O00264 195 aaKnown RBP19.35■□□□□ 0.69
CHTOP-205ENST00000403433 HEXIM1O94992 359 aaKnown RBP19.35■□□□□ 0.69
CHTOP-205ENST00000403433 GYS2P54840 703 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 SOX10P56693 466 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 MAP2K1Q02750 393 aaPredicted RBP19.35■□□□□ 0.69
CHTOP-205ENST00000403433 SH3D19Q5HYK7 790 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 ABHD15Q6UXT9 468 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 NT5DC3Q86UY8 548 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 CHST13Q8NET6 341 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 NLGN2Q8NFZ4 835 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 SLC20A1Q8WUM9 679 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 POMGNT1Q8WZA1 660 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 ADAM21Q9UKJ8 722 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 PRDM4Q9UKN5 801 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 AMFRQ9UKV5 643 aa19.35■□□□□ 0.69
CHTOP-205ENST00000403433 ANKRD62A6NC57 917 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 H0YCG3 227 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 SORBS3O60504 671 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 SUPT20HL2P0C7V6 817 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 USP8P40818 1118 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 HIRAP54198 1017 aaPredicted RBP19.34■□□□□ 0.69
CHTOP-205ENST00000403433 MCCD1P59942 119 aaPredicted RBP19.34■□□□□ 0.69
CHTOP-205ENST00000403433 KRT39Q6A163 491 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 METTL13Q8N6R0 699 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 DNERQ8NFT8 737 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 POLR3FQ9H1D9 316 aaPredicted RBP19.34■□□□□ 0.69
CHTOP-205ENST00000403433 TMEM8AQ9HCN3 771 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 OSGEPQ9NPF4 335 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 GDF3Q9NR23 364 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 TMEM59LQ9UK28 342 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 PTPRFP10586 1907 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 PFASO15067 1338 aa19.34■□□□□ 0.69
CHTOP-205ENST00000403433 BUB1BO60566 1050 aaPredicted RBP19.33■□□□□ 0.69
CHTOP-205ENST00000403433 ABCD1P33897 745 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 GUCY2DQ02846 1103 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 PAK2Q13177 524 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 STXBP2Q15833 593 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 XKR3Q5GH77 459 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms