RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 MAGEF1Q9HAY2 307 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 V9GYQ6 96 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 PLOD2O00469 737 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 CUTAO60888 179 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 ARHGEF6Q15052 776 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 DDI2Q5TDH0 399 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 TRPM5Q9NZQ8 1165 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 FOXP2O15409 715 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 ALBP02768 609 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 KCTD6Q8NC69 237 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 DEPTORQ8TB45 409 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 RAB25P57735 213 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 GUCY2DQ02846 1103 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 SV2CQ496J9 727 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 LAYNQ6UX15 382 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 MMS19Q96T76 1030 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 MTA3Q9BTC8 594 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 RETREG1Q9H6L5 497 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 ZWILCHQ9H900 591 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 CASS4Q9NQ75 786 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 NMRK1Q9NWW6 199 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 AATKQ6ZMQ8 1374 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 DDR2Q16832 855 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 LARP4BQ92615 738 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 TRIM2Q9C040 744 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 ARMC7Q9H6L4 198 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 PTPN22Q9Y2R2 807 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 EVPLQ92817 2033 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 ATP9AO75110 1047 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 NNMTP40261 264 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 ACLYP53396 1101 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 SRP54P61011 504 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 RBBP7Q16576 425 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 FAM213AQ9BRX8 229 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 BAIAP2Q9UQB8 552 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 A0A0G2JND7 137 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 GAS2O43903 313 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 GCFC2P16383 781 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 MARK2Q7KZI7 788 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 OR8K1Q8NGG5 319 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 FRMD8Q9BZ67 464 aaPredicted RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 MARK1Q9P0L2 795 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 RHAGQ02094 409 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 OLFML1Q6UWY5 402 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 LRRC8DQ7L1W4 858 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 GLMNQ92990 594 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 PPP1R2P1Q96PQ5 205 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 USP44Q9H0E7 712 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 CFAP69A5D8W1 941 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 CALCRLQ16602 461 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 RRAGAQ7L523 313 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 KCNK16Q96T55 309 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 CEP72Q9P209 647 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 LYNP07948 512 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 PTK2Q05397 1052 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ANKS6Q68DC2 871 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ZNF713Q8N859 430 aaPredicted RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 CYP26B1Q9NR63 512 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 DDX25Q9UHL0 483 aaKnown RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 RPS6KA6Q9UK32 745 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 KPNA6O60684 536 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 PPP2R1AP30153 589 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 EMBQ6PCB8 327 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ABI1Q8IZP0 508 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 AKAP7Q9P0M2 348 aaPredicted RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 MLXQ9UH92 298 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 MGRN1O60291 552 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 KCNA2P16389 499 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 RAD23BP54727 409 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ANKRD26P1Q6NSI1 321 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 NT5DC4Q86YG4 428 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 RHPN2Q8IUC4 686 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 POMGNT2Q8NAT1 580 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 RUVBL2Q9Y230 463 aaKnown RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 A0A0G2JPF8 293 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ZNF879B4DU55 563 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 HNRNPCL3B7ZW38 293 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 HNRNPCL4P0DMR1 293 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 PSMB7Q99436 277 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 RIOK2Q9BVS4 552 aaKnown RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ZNF500O60304 480 aaPredicted RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 RGS8P57771 180 aaPredicted RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 RIPPLY1Q0D2K3 151 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 PLA2G4DQ86XP0 818 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 SLC16A1P53985 500 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 FANCCQ00597 558 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 LRRC36Q1X8D7 754 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 EPB41L5Q9HCM4 733 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 STK39Q9UEW8 545 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 PODXLO00592 558 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 AP3D1O14617 1153 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 TMCC2O75069 709 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 HSF2Q03933 536 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ANO1Q5XXA6 986 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ZNF692Q9BU19 519 aaPredicted RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 SLC6A15Q9H2J7 730 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 EXOC6BQ9Y2D4 811 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 SPACA6W5XKT8 324 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 CCDC189A1A4V9 331 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 PLEKHG3A1L390 1219 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms