RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CEP120Q8N960 986 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 XXYLT1Q8NBI6 393 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 SCFD2Q8WU76 684 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 ANKRD7Q92527 254 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 IQCDQ96DY2 449 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 FAM84AQ96KN4 292 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 KATNBL1Q9H079 304 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 C17orf75Q9HAS0 396 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 GOLGA6L9A6NEM1 432 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 GRB14Q14449 540 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 C1orf220Q5T0J3 134 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 KCNV1Q6PIU1 500 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 GBP6Q6ZN66 633 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 DPP9Q86TI2 863 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 IFT74Q96LB3 600 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.48■□□□□ 0.23
COL25A1-201ENST00000399126 LRRIQ4A6NIV6 560 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 HNRNPDLO14979 420 aaKnown RBP16.48■□□□□ 0.23
COL25A1-201ENST00000399126 ARL2P36404 184 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 RTP1P59025 263 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 ARHGAP1Q07960 439 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 PPP3CAQ08209 521 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 ARHGAP29Q52LW3 1261 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 SAPCD2Q86UD0 394 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 C12orf56Q8IXR9 622 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 LRRC71Q8N4P6 559 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 NPLOC4Q8TAT6 608 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 CCDC42Q96M95 316 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 MYCBPQ99417 103 aaPredicted RBP16.48■□□□□ 0.23
COL25A1-201ENST00000399126 LACRTQ9GZZ8 138 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 NRBP2Q9NSY0 501 aa16.48■□□□□ 0.23
COL25A1-201ENST00000399126 LGR5O75473 907 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 CDK17Q00537 523 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 MKRN4PQ13434 485 aaPredicted RBP16.47■□□□□ 0.23
COL25A1-201ENST00000399126 PLCB4Q15147 1175 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 ZNF668Q96K58 619 aaPredicted RBP16.47■□□□□ 0.23
COL25A1-201ENST00000399126 SUGCTQ9HAC7 445 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 STRNO43815 780 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 GJB1P08034 283 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 KIF11P52732 1056 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 SFMBT2Q5VUG0 894 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 LRRN4CLQ8ND94 238 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 MAML3Q96JK9 1138 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 EDEM3Q9BZQ6 932 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 PLCB1Q9NQ66 1216 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL25A1-201ENST00000399126 DIS3Q9Y2L1 958 aaKnown RBP16.47■□□□□ 0.23
COL25A1-201ENST00000399126 DUSP10Q9Y6W6 482 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 PHLPP2Q6ZVD8 1323 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 EMSYQ7Z589 1322 aa16.47■□□□□ 0.23
COL25A1-201ENST00000399126 RBAK-RBAKDNI3L0D1 243 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 CYLC1P35663 651 aaPredicted RBP16.46■□□□□ 0.23
COL25A1-201ENST00000399126 GCLMP48507 274 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 VAMP7P51809 220 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 GFPT1Q06210 699 aaPredicted RBP16.46■□□□□ 0.23
COL25A1-201ENST00000399126 CAPSQ13938 189 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 NAA30Q147X3 362 aaPredicted RBP16.46■□□□□ 0.23
COL25A1-201ENST00000399126 SNRNP35Q16560 246 aaKnown RBP16.46■□□□□ 0.23
COL25A1-201ENST00000399126 TDRD12Q587J7 1177 aaKnown RBP16.46■□□□□ 0.23
COL25A1-201ENST00000399126 PLEKHH3Q7Z736 793 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 ABRAQ8N0Z2 381 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 OTUD6BQ8N6M0 293 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 SLC17A8Q8NDX2 589 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 BICD1Q96G01 975 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 POP1Q99575 1024 aaKnown RBP16.46■□□□□ 0.23
COL25A1-201ENST00000399126 RNPEPQ9H4A4 650 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 EXOC7Q9UPT5 735 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 TTLL13PA6NNM8 815 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 EIF3CLB5ME19 914 aaKnown RBP16.46■□□□□ 0.23
COL25A1-201ENST00000399126 ADCY6O43306 1168 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 PEX14O75381 377 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 MAFO75444 373 aaPredicted RBP16.46■□□□□ 0.23
COL25A1-201ENST00000399126 PPP2R5AQ15172 486 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 TERF2Q15554 542 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 IQCEQ6IPM2 695 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 CCDC170Q8IYT3 715 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 ATP8B4Q8TF62 1192 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 POMGNT1Q8WZA1 660 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 CCDC127Q96BQ5 260 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 EIF3CQ99613 913 aaKnown RBP16.46■□□□□ 0.23
COL25A1-201ENST00000399126 TOPORSQ9NS56 1045 aaPredicted RBP16.46■□□□□ 0.23
COL25A1-201ENST00000399126 GUCA1BQ9UMX6 200 aa16.46■□□□□ 0.23
COL25A1-201ENST00000399126 KRT13P13646 458 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 MYL7Q01449 175 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 ZNF569Q5MCW4 686 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 INTS8Q75QN2 995 aaKnown RBP16.45■□□□□ 0.22
COL25A1-201ENST00000399126 AFG1LQ8WV93 481 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 PRPF31Q8WWY3 499 aaKnown RBP16.45■□□□□ 0.22
COL25A1-201ENST00000399126 ZBTB45Q96K62 511 aaPredicted RBP16.45■□□□□ 0.22
COL25A1-201ENST00000399126 HAPLN2Q9GZV7 340 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 DEF6Q9H4E7 631 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 TRPC6Q9Y210 931 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 SIP14410 1827 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 ADGRA2Q96PE1 1338 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 GTPBP10A4D1E9 387 aaKnown RBP16.45■□□□□ 0.22
COL25A1-201ENST00000399126 ZNF286BP0CG31 522 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
COL25A1-201ENST00000399126 ASTE1Q2TB18 679 aaPredicted RBP16.45■□□□□ 0.22
COL25A1-201ENST00000399126 PLPPR4Q7Z2D5 763 aa16.45■□□□□ 0.22
COL25A1-201ENST00000399126 ZNF513Q8N8E2 541 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms