RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FTCDO95954 541 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 MFAP3P55082 362 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 SNRNP35Q16560 246 aaKnown RBP19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PEX26Q7Z412 305 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 USP38Q8NB14 1042 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 RDH13Q8NBN7 331 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 WNK4Q96J92 1243 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 AGPAT1Q99943 283 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PCIF1Q9H4Z3 704 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 TMEM8AQ9HCN3 771 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PDE11AQ9HCR9 933 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PRDM10Q9NQV6 1147 aa19.19■□□□□ 0.66
HLA-DQB1-204ENST00000399084 DENND3A2RUS2 1198 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 RGS20O76081 388 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GPC3P51654 580 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ACTR2P61160 394 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PPP3CAQ08209 521 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 SWSAP1Q6NVH7 229 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 MORC4Q8TE76 937 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PARD3BQ8TEW8 1205 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 CAVIN3Q969G5 261 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 UBE2TQ9NPD8 197 aaPredicted RBP19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 CYP26B1Q9NR63 512 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 AMFRQ9UKV5 643 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 STXBP5LQ9Y2K9 1186 aa19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 COL11A1P12107 1806 aaPredicted RBP19.18■□□□□ 0.66
HLA-DQB1-204ENST00000399084 FOXN3O00409 490 aaPredicted RBP19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 USP2O75604 605 aaPredicted RBP19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 SUPT20HL2P0C7V6 817 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 C1orf220Q5T0J3 134 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ZNF771Q7L3S4 317 aaPredicted RBP19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GLYCTKQ8IVS8 523 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 RASGEF1CQ8N431 466 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GOLGA6L1Q8N7Z2 621 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 LNX1Q8TBB1 728 aaPredicted RBP19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 TRPM4Q8TD43 1214 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 NAP1L3Q99457 506 aaPredicted RBP19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ISCUQ9H1K1 167 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 RBM12Q9NTZ6 932 aaKnown RBP19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ZNF862O60290 1169 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 TGFB3P10600 412 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 COPB2P35606 906 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ALS2CLQ60I27 953 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PLA2G4FQ68DD2 849 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 LBX2Q6XYB7 198 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 RIOX2Q8IUF8 465 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GPIHBP1Q8IV16 184 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 FAM71AQ8IYT1 594 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 OLIG1Q8TAK6 271 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 SCFD2Q8WU76 684 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 HES6Q96HZ4 224 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 MPHOSPH6Q99547 160 aaKnown RBP19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 TMEM117Q9H0C3 514 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GPRC5CQ9NQ84 441 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GDF3Q9NR23 364 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 HPCAL4Q9UM19 191 aa19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 MAFBQ9Y5Q3 323 aaPredicted RBP19.17■□□□□ 0.66
HLA-DQB1-204ENST00000399084 DICER1Q9UPY3 1922 aaKnown RBP19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 LRRIQ3A6PVS8 624 aaPredicted RBP19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PGRMC1O00264 195 aaKnown RBP19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 TULP1O00294 542 aaPredicted RBP19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 KCNK3O14649 394 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 POLR3GO15318 223 aaPredicted RBP19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ADSSP30520 456 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 CYP2C19P33261 490 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 TNNT3P45378 269 aaPredicted RBP19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GCLMP48507 274 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 DLG4P78352 724 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PPATQ06203 517 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PAK2Q13177 524 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 DAAM2Q86T65 1068 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 NT5DC3Q86UY8 548 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 NIFKQ9BYG3 293 aaKnown RBP19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ARHGAP28Q9P2N2 729 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 DMGDHQ9UI17 866 aaKnown RBP19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 LOC285556D6RIA3 1793 aa19.16■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PRKCEQ02156 737 aa19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ARHGAP44Q17R89 818 aa19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 SLFN12LQ6IEE8 588 aa19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 EXOC8Q8IYI6 725 aa19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GPD1LQ8N335 351 aa19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PROCA1Q8NCQ7 364 aaPredicted RBP19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 FBXL13Q8NEE6 735 aa19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 SLC35G2Q8TBE7 412 aa19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 DHX38Q92620 1227 aaKnown RBP19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PSMB7Q99436 277 aa19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ST7Q9NRC1 585 aa19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 CSADQ9Y600 493 aa19.15■□□□□ 0.66
HLA-DQB1-204ENST00000399084 MIF4GDA9UHW6 222 aaKnown RBP19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 RTN2O75298 545 aa19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PIGRP01833 764 aa19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 RFC5P40937 340 aa19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 SHC3Q92529 594 aa19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 CCDC102AQ96A19 550 aa19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 MS4A14Q96JA4 679 aa19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 SLITRK6Q9H5Y7 841 aa19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 SUGCTQ9HAC7 445 aa19.14■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ADARB2Q9NS39 739 aaKnown RBP19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms