RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 TMEM47Q9BQJ4 181 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 RAD17O75943 681 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 IFNA8P32881 189 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 PGM1P36871 562 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 PDXDC1Q6P996 788 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 USP17L6PQ6QN14 398 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 ARMC2Q8NEN0 867 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 DDX56Q9NY93 547 aaKnown RBP12.52□□□□□ -0.41
TMF1-201ENST00000398559 POTEFA5A3E0 1075 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 MYBL1P10243 752 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 HLA-DPA1P20036 260 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 MDH1P40925 334 aaKnown RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 NEK2P51955 445 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 SHC4Q6S5L8 630 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 RHOT1Q8IXI2 618 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 FAM49AQ9H0Q0 323 aaPredicted RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 ERVV-1B6SEH8 477 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 CYP2E1P05181 493 aaPredicted RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 ENO1P06733 434 aaKnown RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 LTKP29376 864 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 ANKMY2Q8IV38 441 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 PPP1R36Q96LQ0 422 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 BSDC1Q9NW68 430 aaPredicted RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 SLC8A2Q9UPR5 921 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 SUGT1Q9Y2Z0 365 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 STAT3P40763 770 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 MKRN3Q13064 507 aaKnown RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 FBXW10Q5XX13 1052 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 SRLQ86TD4 932 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 ENAHQ8N8S7 591 aaPredicted RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 TSR3Q9UJK0 312 aaKnown RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 SEC24DO94855 1032 aaPredicted RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 ERFP50548 548 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 ARSEP51690 589 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 STAG2Q8N3U4 1231 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 ULK4Q96C45 1275 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 KCNF1Q9H3M0 494 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 SLC9A2Q9UBY0 812 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 DENND3A2RUS2 1198 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 ASAP2O43150 1006 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 KRT7P08729 469 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 FCER1AP12319 257 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 HIC1Q14526 733 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 ZNF568Q3ZCX4 644 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 KIAA1755Q5JYT7 1200 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 TMEM179Q6ZVK1 233 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 HNRNPCP07910 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMF1-201ENST00000398559 TBXAS1P24557 533 aaPredicted RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 KCNQ4P56696 695 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 CYTH1Q15438 398 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 SUPT20HL1Q3ZLR7 823 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 CATSPER4Q7RTX7 472 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 GLYCTKQ8IVS8 523 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 MB21D2Q8IYB1 491 aaPredicted RBP12.51□□□□□ -0.41
TMF1-201ENST00000398559 NDUFAF2Q8N183 169 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 IL17RAQ96F46 866 aa12.51□□□□□ -0.41
TMF1-201ENST00000398559 MEFVO15553 781 aaPredicted RBP12.5□□□□□ -0.41
TMF1-201ENST00000398559 GH2P01242 217 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 KRT4P19013 534 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 LBRQ14739 615 aaKnown RBP12.5□□□□□ -0.41
TMF1-201ENST00000398559 FAM196AQ6ZSG2 479 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 DDIASQ8IXT1 998 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 RUBCNQ92622 972 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 WDR19Q8NEZ3 1342 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 PLEKHG1Q9ULL1 1385 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 SDC4P31431 198 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 MXD4Q14582 209 aaPredicted RBP12.5□□□□□ -0.41
TMF1-201ENST00000398559 LONP2Q86WA8 852 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 SH2D3CQ8N5H7 860 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 DPF2Q92785 391 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 ATXN7L3BQ96GX2 97 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
TMF1-201ENST00000398559 A0A1W2PQC6 194 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 E5RI56 91 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 CHN1P15882 459 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 TNFAIP2Q03169 654 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 KDSRQ06136 332 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 MAPK6Q16659 721 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 MCPH1Q8NEM0 835 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 DTX3LQ8TDB6 740 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 RFFLQ8WZ73 363 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 RNPC3Q96LT9 517 aaKnown RBP12.5□□□□□ -0.41
TMF1-201ENST00000398559 USP17L10C9JJH3 530 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 GOLGA8RI6L899 631 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms