RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 DHX16O60231 1041 aaKnown RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 KDM1AO60341 852 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 NDUFS2O75306 463 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 GFPT2O94808 682 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 DDX58O95786 925 aaKnown RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 GSTM1P09488 218 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 VEGFAP15692 232 aaPredicted RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 PRKCAP17252 672 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 ARL4AP40617 200 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 TECP42680 631 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 MTNR1BP49286 362 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 CEBPAP49715 358 aaPredicted RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 ERVFRD-1P60508 538 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 SMAD3P84022 425 aaKnown RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 SRSF3P84103 164 aaKnown RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 SCRN1Q12765 414 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 PPP2R5DQ14738 602 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 KIF22Q14807 665 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 PDCD1Q15116 288 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 CNN3Q15417 329 aaKnown RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 SMAD2Q15796 467 aaKnown RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 PGS1Q32NB8 556 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 TBC1D10BQ4KMP7 808 aaPredicted RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 ANO6Q4KMQ2 910 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 CCDC92Q53HC0 331 aaPredicted RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 RTP2Q5QGT7 225 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 SWSAP1Q6NVH7 229 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 LBX2Q6XYB7 198 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 RFX8Q6ZV50 586 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 GALNT5Q7Z7M9 940 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 SLCO6A1Q86UG4 719 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 AMIGO3Q86WK7 504 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 CACNA2D3Q8IZS8 1091 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 PRR18Q8N4B5 295 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 CISD2Q8N5K1 135 aaKnown RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 C2orf69Q8N8R5 385 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 TMEM52Q8NDY8 209 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 NPLOC4Q8TAT6 608 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 PHKBQ93100 1093 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 FERMT2Q96AC1 680 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 LTV1Q96GA3 475 aaPredicted RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 TMEM41AQ96HV5 264 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 ZC3H10Q96K80 434 aaKnown RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 LRFN3Q9BTN0 628 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 BOCQ9BWV1 1114 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 LSM14BQ9BX40 385 aaKnown RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 SLC12A9Q9BXP2 914 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 MS4A5Q9H3V2 200 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 ATP6V0A4Q9HBG4 840 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 HELLSQ9NRZ9 838 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 DNAJC28Q9NX36 388 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 SIRT5Q9NXA8 310 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 SERPINB13Q9UIV8 391 aa3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 CNOT6Q9ULM6 557 aaKnown RBP3.79□□□□□ -1.8
RPS4XP3-201ENST00000398541 ANKRD18BA2A2Z9 1011 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 B4E171 279 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 FOXN3O00409 490 aaPredicted RBP3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 GSTA4O15217 222 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 MEFVO15553 781 aaPredicted RBP3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 PLOD3O60568 738 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 MPOP05164 745 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 THBDP07204 575 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 PDCP20941 246 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 HTR1BP28222 390 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 VIPR1P32241 457 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 ELF1P32519 619 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 KRT9P35527 623 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 ADD2P35612 726 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 TSPAN7P41732 249 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 DNM2P50570 870 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 MAPK10P53779 464 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 ARL4CP56559 192 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 YBX1P67809 324 aaKnown RBP3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 CYP4F8P98187 520 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 SRSF2Q01130 221 aaKnown RBP3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 PFKPQ01813 784 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 ROR1Q01973 937 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 KIF23Q02241 960 aaPredicted RBP3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 LAPTM5Q13571 262 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 TAF12Q16514 161 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 KIZQ2M2Z5 673 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 UAP1L1Q3KQV9 507 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 FAM209BQ5JX69 171 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 GPATCH4Q5T3I0 446 aaKnown RBP3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 PGBD2Q6P3X8 592 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 CHCHD4Q8N4Q1 142 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 LSMEM1Q8N8F7 131 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 NAT16Q8N8M0 369 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 PCYOX1LQ8NBM8 494 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 NUP43Q8NFH3 380 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 TGFBRAP1Q8WUH2 860 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 FBXW5Q969U6 566 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 RSRC1Q96IZ7 334 aaKnown RBP3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 ZSCAN31Q96LW9 406 aaPredicted RBP3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 ZDHHC15Q96MV8 337 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 JMJD8Q96S16 334 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 NUDT16L1Q9BRJ7 211 aaKnown RBP3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 PLEKHA5Q9HAU0 1116 aa3.78□□□□□ -1.8
RPS4XP3-201ENST00000398541 UBN1Q9NPG3 1134 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms