RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 GPR162Q16538 588 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 WLSQ5T9L3 541 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 DBX2Q6ZNG2 339 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 COLGALT2Q8IYK4 626 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 LINC00116Q8NCU8 138 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 ZNF540Q8NDQ6 660 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 AIDAQ96BJ3 306 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 ARL8AQ96BM9 186 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 KANSL2Q9H9L4 492 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 HPSEQ9Y251 543 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 TRAV6A0A075B6T7 132 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 PI4K2BG5E9Z4 385 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 ERLIN2O94905 339 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 MAP2K5Q13163 448 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 TUBB2AQ13885 445 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 NAA25Q14CX7 972 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 SLC9C2Q5TAH2 1124 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 APOA5Q6Q788 366 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 CGREF1Q99674 301 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 DESI2Q9BSY9 194 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 TUBB2BQ9BVA1 445 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 RTFDC1Q9BY42 306 aaPredicted RBP7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 PUS3Q9BZE2 481 aaKnown RBP7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 XAB2Q9HCS7 855 aaKnown RBP7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 UBN1Q9NPG3 1134 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 CNNM1Q9NRU3 951 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 PCDHA5Q9Y5H7 936 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 SNX8Q9Y5X2 465 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 FHOD1Q9Y613 1164 aa7.08□□□□□ -1.28
TM9SF4-202ENST00000398022 MROH7-TTC4A0A0A0MT08 1334 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 FAM237AA0A1B0GTK4 181 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 SH2B2O14492 632 aaPredicted RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 IFIT3O14879 490 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ACSL4O60488 711 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 BAG2O95816 211 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 RXRGP48443 463 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ST13P50502 369 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ANTXR2P58335 489 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 THEMIS2Q5TEJ8 643 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 FBXW10Q5XX13 1052 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 SHC4Q6S5L8 630 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 CCDC13Q8IYE1 715 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 LRRC47Q8N1G4 583 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 IPMKQ8NFU5 416 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 NOC3LQ8WTT2 800 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ALKBH8Q96BT7 664 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 SLC26A6Q9BXS9 759 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 PUS7LQ9H0K6 701 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ZWILCHQ9H900 591 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 VTI1BQ9UEU0 232 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 MTF2Q9Y483 593 aaPredicted RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 NFE2L3Q9Y4A8 694 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 CD2APQ9Y5K6 639 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 PCDH11XQ9BZA7 1347 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 PCDH11YQ9BZA8 1340 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ERVV-2B6SEH9 535 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 RNGTTO60942 597 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 RPS6KA5O75582 802 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 F2P00734 622 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 NPPAP01160 153 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 UQCRFS1P1P0C7P4 283 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ADORA1P30542 326 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ETFBP38117 255 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 UBE3CQ15386 1083 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 MCF2L2Q86YR7 1114 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 FAM20CQ8IXL6 584 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 DEPTORQ8TB45 409 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 CCDC12Q8WUD4 166 aaPredicted RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 DHX58Q96C10 678 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 MTMR12Q9C0I1 747 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 NAPBQ9H115 298 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 GJB4Q9NTQ9 266 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 EMC3Q9P0I2 261 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 SH3BGRL2Q9UJC5 107 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ZNF148Q9UQR1 794 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 MAP3K15Q6ZN16 1313 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 STK36Q9NRP7 1315 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 NBPF26B4DH59 902 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 USO1O60763 962 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 TMEM127O75204 238 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 TMCC1O94876 653 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ALAS1P13196 640 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 CDC25CP30307 473 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 CHMP4BP1P59074 171 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 MRPS15P82914 257 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ITPK1Q13572 414 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 CCDC153Q494R4 210 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 TMTC4Q5T4D3 741 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 LDHAL6AQ6ZMR3 332 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 SMIM5Q71RC9 77 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 NOSTRINQ8IVI9 506 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 CNKSR1Q969H4 720 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 GMCL1Q96IK5 515 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 NAA15Q9BXJ9 866 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 KRT23Q9C075 422 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 PRM3Q9NNZ6 103 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ABCF3Q9NUQ8 709 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 ZIM2Q9NZV7 527 aa7.07□□□□□ -1.28
TM9SF4-202ENST00000398022 GIMAP2Q9UG22 337 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms