RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 CPP00450 1065 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 LSP1P33241 339 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 STXBP2Q15833 593 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 CDO1Q16878 200 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 NBPF9Q3BBW0 867 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 PAPD7Q5XG87 772 aaKnown RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 DPP9Q86TI2 863 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 AFAP1L2Q8N4X5 818 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 USP38Q8NB14 1042 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 SLC30A5Q8TAD4 765 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 MYO3BQ8WXR4 1341 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 ZNF668Q96K58 619 aaPredicted RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 C9orf72Q96LT7 481 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 EIF3HO15372 352 aaKnown RBP eCLIP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 NPEPPSP55786 919 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 RASIP1Q5U651 963 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 DCPSQ96C86 337 aaKnown RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 SEMA6BQ9H3T3 888 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 AFF2P51816 1311 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 FRMD3A2A2Y4 597 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 GPC4O75487 556 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 KRT37O76014 449 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 ARL4AP40617 200 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 RPS6KA2Q15349 733 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 RSRC2Q7L4I2 434 aaKnown RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 VGLL2Q8N8G2 317 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 NSMCE1Q8WV22 266 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 NEURL4Q96JN8 1562 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 CA8P35219 290 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 EXOC8Q8IYI6 725 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 PPP1R16BQ96T49 567 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 NACA2Q9H009 215 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 CARD9Q9H257 536 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 RPF1Q9H9Y2 349 aaKnown RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 TXLNGQ9NUQ3 528 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 FBXO28Q9NVF7 368 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 CRCPO75575 148 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 IRX4P78413 519 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 EAPPQ56P03 285 aaPredicted RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 ENOSF1Q7L5Y1 443 aa13.28□□□□□ -0.28
SOCS6-201ENST00000397942 CELF4Q9BZC1 486 aaKnown RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
SOCS6-201ENST00000397942 XPOTO43592 962 aaKnown RBP13.27□□□□□ -0.28
SOCS6-201ENST00000397942 ESRRAP11474 423 aaPredicted RBP13.27□□□□□ -0.28
SOCS6-201ENST00000397942 ACTN3Q08043 901 aaPredicted RBP13.27□□□□□ -0.28
SOCS6-201ENST00000397942 NXNQ6DKJ4 435 aa13.27□□□□□ -0.28
SOCS6-201ENST00000397942 DPY19L2Q6NUT2 758 aa13.27□□□□□ -0.28
SOCS6-201ENST00000397942 ZNF277Q9NRM2 450 aaPredicted RBP13.27□□□□□ -0.28
SOCS6-201ENST00000397942 FAM237AA0A1B0GTK4 181 aa13.27□□□□□ -0.28
SOCS6-201ENST00000397942 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.28
SOCS6-201ENST00000397942 ARL4CP56559 192 aa13.27□□□□□ -0.28
SOCS6-201ENST00000397942 IFRD2Q12894 506 aaPredicted RBP13.27□□□□□ -0.28
SOCS6-201ENST00000397942 TTC17Q96AE7 1141 aa13.27□□□□□ -0.28
SOCS6-201ENST00000397942 HVCN1Q96D96 273 aa13.27□□□□□ -0.28
SOCS6-201ENST00000397942 MED10Q9BTT4 135 aa13.27□□□□□ -0.28
SOCS6-201ENST00000397942 LRRC4Q9HBW1 653 aa13.27□□□□□ -0.28
SOCS6-201ENST00000397942 AGO2Q9UKV8 859 aaKnown RBP13.27□□□□□ -0.28
SOCS6-201ENST00000397942 PRRC2BQ5JSZ5 2229 aaKnown RBP13.27□□□□□ -0.29
SOCS6-201ENST00000397942 FRMPD1Q5SYB0 1578 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 CLTCQ00610 1675 aaKnown RBP13.27□□□□□ -0.29
SOCS6-201ENST00000397942 GOLGA8MH3BSY2 632 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 MAPK13O15264 365 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 CAV1Q03135 178 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 TBX2Q13207 712 aaPredicted RBP13.27□□□□□ -0.29
SOCS6-201ENST00000397942 TRIM42Q8IWZ5 723 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 MORC4Q8TE76 937 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 SYN2Q92777 582 aaPredicted RBP13.27□□□□□ -0.29
SOCS6-201ENST00000397942 HOXC10Q9NYD6 342 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 RBAKQ9NYW8 714 aaPredicted RBP13.27□□□□□ -0.29
SOCS6-201ENST00000397942 BCAP29Q9UHQ4 241 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 A0A0G2JND7 137 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 CHRNA5P30532 468 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 TTC13Q8NBP0 860 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 VCPKMTQ9H867 229 aa13.27□□□□□ -0.29
SOCS6-201ENST00000397942 ENTPD3O75355 529 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 GNA15P30679 374 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 TPD52P55327 224 aaPredicted RBP13.26□□□□□ -0.29
SOCS6-201ENST00000397942 CCNA1P78396 465 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 GPS1Q13098 491 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 BAATQ14032 418 aaPredicted RBP13.26□□□□□ -0.29
SOCS6-201ENST00000397942 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 MAP3K21Q5TCX8 1036 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 ERP44Q9BS26 406 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 HSPBP1Q9NZL4 362 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 CHORDC1Q9UHD1 332 aaPredicted RBP13.26□□□□□ -0.29
SOCS6-201ENST00000397942 HEY1Q9Y5J3 304 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 RSPH10B2B2RC85 870 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 H0Y3Z8 333 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 SLC16A3O15427 465 aaKnown RBP13.26□□□□□ -0.29
SOCS6-201ENST00000397942 RSPH10BP0C881 870 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 CASP4P49662 377 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 ASPHQ12797 758 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 SYT2Q8N9I0 419 aaPredicted RBP13.26□□□□□ -0.29
SOCS6-201ENST00000397942 ETNK1Q9HBU6 452 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 IL17RBQ9NRM6 502 aa13.26□□□□□ -0.29
SOCS6-201ENST00000397942 PI4K2BG5E9Z4 385 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms