RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 RNF14Q9UBS8 474 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 RIPK3Q9Y572 518 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 IGSF9BQ9UPX0 1349 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 AGPSO00116 658 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 CYP3A4P08684 503 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 GMPSP49915 693 aaPredicted RBP11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 PDE6CP51160 858 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 SEC24CP53992 1094 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 SNRNP35Q16560 246 aaKnown RBP11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 ZBTB33Q86T24 672 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 SLC47A2Q86VL8 602 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 RFFLQ8WZ73 363 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 NT5C1BQ96P26 610 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 TAF1DQ9H5J8 278 aaPredicted RBP11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 SEL1LQ9UBV2 794 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 ASIC3Q9UHC3 531 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 EXOC7Q9UPT5 735 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 DAAM1Q9Y4D1 1078 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 ALG6Q9Y672 507 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 ANKRD63C9JTQ0 380 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 NR3C2P08235 984 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 PRLRP16471 622 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 DR1Q01658 176 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 C10orf76Q5T2E6 689 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 MGARPQ8TDB4 240 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 LRRC45Q96CN5 670 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 MRIQ9BWK5 157 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 VIPAS39Q9H9C1 493 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 HACL1Q9UJ83 578 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 ODF2LQ9ULJ1 636 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 NR2E1Q9Y466 385 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 PCDHGC5Q9Y5F6 944 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 FRMD3A2A2Y4 597 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 EIF3DO15371 548 aaKnown RBP eCLIP11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 PLS3P13797 630 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 NR1D1P20393 614 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 CNGA1P29973 690 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 BAG6P46379 1132 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 MARCKSL1P49006 195 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 PSMC5P62195 406 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 WDR44Q5JSH3 913 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 CAPN12Q6ZSI9 719 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 EPM2AIP1Q7L775 607 aaPredicted RBP11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 OTUD6AQ7L8S5 288 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 CPNE8Q86YQ8 564 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 MBOAT7Q96N66 472 aa11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 COL5A3P25940 1745 aaPredicted RBP11.26□□□□□ -0.61
CPSF1P1-201ENST00000397477 MMEP08473 750 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 CD58P19256 250 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 IRAK1P51617 712 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 MRPS9P82933 396 aaKnown RBP11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 STRN3Q13033 797 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 ANGEL2Q5VTE6 544 aaKnown RBP11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 KAZNQ674X7 775 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 ZNF662Q6ZS27 426 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 NCAPG2Q86XI2 1143 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 RIT2Q99578 217 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 RASSF4Q9H2L5 321 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 AGO4Q9HCK5 861 aaKnown RBP11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 SIX2Q9NPC8 291 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 LCA5LO95447 670 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 TMOD1P28289 359 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 DAB2IPQ5VWQ8 1189 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 CDR2LQ86X02 465 aaPredicted RBP11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 DAW1Q8N136 415 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 DEPTORQ8TB45 409 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 TAS1R2Q8TE23 839 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 C1orf54Q8WWF1 131 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 CPA5Q8WXQ8 436 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 INPP4AQ96PE3 977 aaPredicted RBP11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 NUP85Q9BW27 656 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 TBC1D22BQ9NU19 505 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 GINS2Q9Y248 185 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 FRMPD4Q14CM0 1322 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 COMTP21964 271 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 MFAP3P55082 362 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 PLCB3Q01970 1234 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 GLE1Q53GS7 698 aaKnown RBP11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 TTMPQ5BVD1 217 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 GSTA5Q7RTV2 222 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 IPO4Q8TEX9 1081 aaKnown RBP11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 KRT35Q92764 455 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 TATDN2Q93075 761 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 TELO2Q9Y4R8 837 aa11.25□□□□□ -0.61
CPSF1P1-201ENST00000397477 WDR46O15213 610 aaKnown RBP11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 SRGAP2CP0DJJ0 459 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 FLT3P36888 993 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 NPTX2P47972 431 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 IFNAR2P48551 515 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 IRX5P78411 483 aaPredicted RBP11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 ALS2CLQ60I27 953 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 SPOPLQ6IQ16 392 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 LLGL2Q6P1M3 1020 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 PDCD2LQ9BRP1 358 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 UBXN6Q9BZV1 441 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 C1orf112Q9NSG2 853 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 KLHL11Q9NVR0 708 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms