RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CNTNAP2Q9UHC6 1331 aa23.37■■□□□ 1.33
TSPAN4-206ENST00000397408 CHD7Q9P2D1 2997 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 LINC01553A4QN01 128 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 MYMKA6NI61 221 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 SLC16A4O15374 487 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 FGFR1P11362 822 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 ATF7P17544 494 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 RAB27AP51159 221 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 DYMQ7RTS9 669 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 IQUBQ8NA54 791 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 SPIRE2Q8WWL2 714 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 DDX12PQ92771 950 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 ZNF689Q96CS4 500 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 CCDC51Q96ER9 411 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 CUEDC2Q9H467 287 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 ZHX3Q9H4I2 956 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 TSHZ2Q9NRE2 1034 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 MYO9BQ13459 2157 aa23.36■■□□□ 1.33
TSPAN4-206ENST00000397408 POLR2DO15514 142 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 SKIP12755 728 aa23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 ZNF131P52739 623 aa23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 PRPF4BQ13523 1007 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 TMEM132AQ24JP5 1023 aa23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 TPRNQ4KMQ1 711 aa23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 PAN2Q504Q3 1202 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 UBXN11Q5T124 520 aa23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 SPRED2Q7Z698 418 aa23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 ZNF598Q86UK7 904 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 PARVGQ9HBI0 331 aa23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 CHMP5Q9NZZ3 219 aa23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 KCNH3Q9ULD8 1083 aa23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 RBM19Q9Y4C8 960 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-206ENST00000397408 TTLL13PA6NNM8 815 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 K7ERI5 159 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 ACKR2O00590 384 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 EDN1P05305 212 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 CMA1P23946 247 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 SMTNP53814 917 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 BTG3Q14201 252 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 CDR2LQ86X02 465 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 CMTR2Q8IYT2 770 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 MYCT1Q8N699 235 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 STAMQ92783 540 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 EIF2AQ9BY44 585 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 TNMDQ9H2S6 317 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 CERS4Q9HA82 394 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 KCNG1Q9UIX4 513 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 USP20Q9Y2K6 914 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 PCDHB2Q9Y5E7 798 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 CDH23Q9H251 3354 aa23.34■■□□□ 1.33
TSPAN4-206ENST00000397408 A0A1B0GVL5 298 aa23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 TBKBP1A7MCY6 615 aa23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 HOXA2O43364 376 aa23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 EOMESO95936 686 aa23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 PFKFB1P16118 471 aa23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 LONRF3Q496Y0 759 aa23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 FIBCD1Q8N539 461 aa23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 TMEM161BQ8NDZ6 487 aa23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 NTPCRQ9BSD7 190 aaKnown RBP23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 TMEM134Q9H6X4 195 aa23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 RNF19AQ9NV58 838 aa23.33■■□□□ 1.33
TSPAN4-206ENST00000397408 A0A1B0GUA9 196 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 ZNF623O75123 536 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 NCKAP1LP55160 1127 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 GRIN2CQ14957 1233 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 SLC27A1Q6PCB7 646 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 TAS1R3Q7RTX0 852 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 LPPQ93052 612 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 DNAJC19Q96DA6 116 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 TGS1Q96RS0 853 aaKnown RBP23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 PYM1Q9BRP8 204 aaKnown RBP23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 TRIM6Q9C030 488 aaPredicted RBP23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 PDZD7Q9H5P4 517 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 KBTBD4Q9NVX7 518 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 MTMR10Q9NXD2 777 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 MTUS1Q9ULD2 1270 aa23.33■■□□□ 1.32
TSPAN4-206ENST00000397408 FNDC1Q4ZHG4 1894 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 A0A1W2PQ27 194 aa23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 A0A1W2PQ64 194 aa23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 A0A1W2PQD8 194 aa23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 K7ENM7 598 aa23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 N4BP3O15049 544 aa23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 CLLU1OSQ5K130 101 aa23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 ABI1Q8IZP0 508 aa23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 ARNTL2Q8WYA1 636 aa23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 TMEM117Q9H0C3 514 aa23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 MAGEF1Q9HAY2 307 aa23.32■■□□□ 1.32
TSPAN4-206ENST00000397408 MEIS3P2A8K0S8 358 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 H0YCG3 227 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 TRAK2O60296 914 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 NPTXRO95502 500 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 MAPTP10636 758 aaKnown RBP23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 IDEP14735 1019 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 NT5DC1Q5TFE4 455 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 SFR1Q86XK3 245 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 FAM178BQ8IXR5 827 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 FSIP1Q8NA03 581 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 HELQQ8TDG4 1101 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 PGBD4Q96DM1 585 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 GUCD1Q96NT3 240 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms