RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SPAG1Q07617 926 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 NCAPHQ15003 741 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 KIZQ2M2Z5 673 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 C1orf53Q5VUE5 145 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 C12orf56Q8IXR9 622 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 TMEM174Q8WUU8 243 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 SENP6Q9GZR1 1112 aaPredicted RBP25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 FZD8Q9H461 694 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 THAP9Q9H5L6 903 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 TRPV2Q9Y5S1 764 aa25.84■■□□□ 1.73
TSPAN4-202ENST00000397396 ACKR2O00590 384 aa25.83■■□□□ 1.73
TSPAN4-202ENST00000397396 KIAA0391O15091 583 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-202ENST00000397396 CETN3O15182 167 aa25.83■■□□□ 1.73
TSPAN4-202ENST00000397396 PMS1P54277 932 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-202ENST00000397396 MBTD1Q05BQ5 628 aa25.83■■□□□ 1.73
TSPAN4-202ENST00000397396 KCNA1Q09470 495 aa25.83■■□□□ 1.73
TSPAN4-202ENST00000397396 SLFN12LQ6IEE8 588 aa25.83■■□□□ 1.73
TSPAN4-202ENST00000397396 ANKRD20A12PQ8NF67 263 aa25.83■■□□□ 1.73
TSPAN4-202ENST00000397396 AGPAT3Q9NRZ7 376 aa25.83■■□□□ 1.73
TSPAN4-202ENST00000397396 TRMT13Q9NUP7 481 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-202ENST00000397396 TGFB1I1O43294 461 aa25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 ERLIN2O94905 339 aa25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 GNA14O95837 355 aa25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 COL6A1P12109 1028 aa25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 SFPQP23246 707 aaKnown RBP eCLIP25.82■■□□□ 1.722e-6■■■■□ 23.9
TSPAN4-202ENST00000397396 MRE11P49959 708 aa25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 NCBP1Q09161 790 aaKnown RBP25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 TAS1R3Q7RTX0 852 aa25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 SLC9A9Q8IVB4 645 aa25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 CAGE1Q8TC20 777 aa25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 MED15Q96RN5 788 aa25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 DUSP9Q99956 384 aaKnown RBP25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 CELF4Q9BZC1 486 aaKnown RBP25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 C11orf49Q9H6J7 331 aa25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 MAGEC2Q9UBF1 373 aaPredicted RBP25.82■■□□□ 1.72
TSPAN4-202ENST00000397396 B4GALT4O60513 344 aa25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 NR3C1P04150 777 aa25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 DARSP14868 501 aaKnown RBP25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 GARTP22102 1010 aa25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 EIF4BP23588 611 aaKnown RBP25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 NR2F2P24468 414 aa25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 MNX1P50219 401 aaPredicted RBP25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 PRPF4BQ13523 1007 aaKnown RBP25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 ARMCX5Q6P1M9 558 aa25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 SLC39A5Q6ZMH5 540 aa25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 FAM126BQ8IXS8 530 aa25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 ZC3H3Q8IXZ2 948 aaKnown RBP25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 CTAGE1Q96RT6 745 aa25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 PPP1R16BQ96T49 567 aa25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 GRPEL1Q9HAV7 217 aa25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 TRIP12Q14669 1992 aaPredicted RBP25.81■■□□□ 1.72
TSPAN4-202ENST00000397396 THPOP40225 353 aa25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 RBL2Q08999 1139 aa25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 TMEM62Q0P6H9 643 aa25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 ADAM9Q13443 819 aa25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 SNX17Q15036 470 aa25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 APBB1IPQ7Z5R6 666 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 TOX2Q96NM4 488 aa25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 OSMRQ99650 979 aa25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 SRRTQ9BXP5 876 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 FANCLQ9NW38 375 aa25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 GINS2Q9Y248 185 aa25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 CDY2AQ9Y6F7 541 aa25.8■■□□□ 1.72
TSPAN4-202ENST00000397396 SLC16A3O15427 465 aaKnown RBP25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 EEF1GP26641 437 aaKnown RBP25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 BFSP2Q13515 415 aa25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 TMEM132AQ24JP5 1023 aa25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 CDKAL1Q5VV42 579 aa25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 ANKRD33Q7Z3H0 272 aa25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 NECAB2Q7Z6G3 386 aa25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 FILIP1Q7Z7B0 1213 aa25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 ZNF668Q96K58 619 aaPredicted RBP25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 MKNK1Q9BUB5 465 aa25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 STYXL1Q9Y6J8 313 aa25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 CNTNAP2Q9UHC6 1331 aa25.79■■□□□ 1.72
TSPAN4-202ENST00000397396 DCDC2CA8MYV0 355 aa25.78■■□□□ 1.72
TSPAN4-202ENST00000397396 TOM1L1O75674 476 aa25.78■■□□□ 1.72
TSPAN4-202ENST00000397396 ZNF18P17022 549 aa25.78■■□□□ 1.72
TSPAN4-202ENST00000397396 CDK11BP21127 795 aaKnown RBP25.78■■□□□ 1.72
TSPAN4-202ENST00000397396 AXLP30530 894 aa25.78■■□□□ 1.72
TSPAN4-202ENST00000397396 FAM26DQ5JW98 314 aa25.78■■□□□ 1.72
TSPAN4-202ENST00000397396 LRRC55Q6ZSA7 311 aa25.78■■□□□ 1.72
TSPAN4-202ENST00000397396 TRPV6Q9H1D0 765 aa25.78■■□□□ 1.72
TSPAN4-202ENST00000397396 FRMD4BQ9Y2L6 1034 aa25.78■■□□□ 1.72
TSPAN4-202ENST00000397396 SQORQ9Y6N5 450 aa25.78■■□□□ 1.72
TSPAN4-202ENST00000397396 LDHAP00338 332 aaKnown RBP25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 CD4P01730 458 aa25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 MGAT3Q09327 533 aa25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 TRIM71Q2Q1W2 868 aaKnown RBP25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 ATF7IP2Q5U623 682 aa25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 TSHZ1Q6ZSZ6 1077 aa25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 CATSPER4Q7RTX7 472 aa25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 USP38Q8NB14 1042 aa25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 POMGNT1Q8WZA1 660 aa25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 DHX38Q92620 1227 aaKnown RBP25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 ACO2Q99798 780 aaKnown RBP25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 TARS2Q9BW92 718 aaKnown RBP25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 MINDY3Q9H8M7 445 aa25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 KIAA1586Q9HCI6 787 aa25.77■■□□□ 1.72
TSPAN4-202ENST00000397396 DMAC2Q9NW81 257 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms