RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 HPS3Q969F9 1004 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 IFT74Q96LB3 600 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 CNOT6LQ96LI5 555 aaKnown RBP16.34■□□□□ 0.21
CAPN3-207ENST00000397200 C17orf75Q9HAS0 396 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 SLC39A2Q9NP94 309 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 SUCLA2Q9P2R7 463 aaPredicted RBP16.34■□□□□ 0.21
CAPN3-207ENST00000397200 SEL1LQ9UBV2 794 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 AKT3Q9Y243 479 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 TPM1P09493 284 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 ETF1P62495 437 aaKnown RBP16.34■□□□□ 0.21
CAPN3-207ENST00000397200 MXD4Q14582 209 aaPredicted RBP16.34■□□□□ 0.21
CAPN3-207ENST00000397200 SYCP1Q15431 976 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 PTGISQ16647 500 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 TAF2Q6P1X5 1199 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 TRIM65Q6PJ69 517 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 RUFY4Q6ZNE9 571 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 ASAP3Q8TDY4 903 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
CAPN3-207ENST00000397200 PRPF31Q8WWY3 499 aaKnown RBP16.34■□□□□ 0.21
CAPN3-207ENST00000397200 FAM49AQ9H0Q0 323 aaPredicted RBP16.34■□□□□ 0.21
CAPN3-207ENST00000397200 NOD1Q9Y239 953 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 COL6A1P12109 1028 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 GLRA2P23416 452 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 PEX3P56589 373 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 UBXN1Q04323 297 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 PPP2R5AQ15172 486 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 FAM26FQ5R3K3 315 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 LRRC55Q6ZSA7 311 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 TOGARAM2Q6ZUX3 1019 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 RHPN2Q8IUC4 686 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 FAM178BQ8IXR5 827 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 KIAA0319LQ8IZA0 1049 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 TUBGCP2Q9BSJ2 902 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 TTYH3Q9C0H2 523 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 C11orf49Q9H6J7 331 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 MRPL44Q9H9J2 332 aaKnown RBP16.33■□□□□ 0.2
CAPN3-207ENST00000397200 L2HGDHQ9H9P8 463 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 OLFML3Q9NRN5 406 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 ABHD10Q9NUJ1 306 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 TBC1D7Q9P0N9 293 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 KCNG1Q9UIX4 513 aa16.33■□□□□ 0.2
CAPN3-207ENST00000397200 ASAP2O43150 1006 aa16.32■□□□□ 0.2
CAPN3-207ENST00000397200 SMTNP53814 917 aa16.32■□□□□ 0.2
CAPN3-207ENST00000397200 ATN1P54259 1190 aaPredicted RBP16.32■□□□□ 0.2
CAPN3-207ENST00000397200 LAMTOR4Q0VGL1 99 aa16.32■□□□□ 0.2
CAPN3-207ENST00000397200 MIIPQ5JXC2 388 aa16.32■□□□□ 0.2
CAPN3-207ENST00000397200 RAD9BQ6WBX8 426 aa16.32■□□□□ 0.2
CAPN3-207ENST00000397200 BSNDQ8WZ55 320 aa16.32■□□□□ 0.2
CAPN3-207ENST00000397200 PAWRQ96IZ0 340 aaKnown RBP16.32■□□□□ 0.2
CAPN3-207ENST00000397200 ERGIC2Q96RQ1 377 aa16.32■□□□□ 0.2
CAPN3-207ENST00000397200 TRMT13Q9NUP7 481 aaKnown RBP16.32■□□□□ 0.2
CAPN3-207ENST00000397200 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
CAPN3-207ENST00000397200 CCDC169A6NNP5 214 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 FGFR1OPO95684 399 aaKnown RBP16.31■□□□□ 0.2
CAPN3-207ENST00000397200 VTNP04004 478 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 NAMPTP43490 491 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 NPTX2P47972 431 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 CDK7P50613 346 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 CAPSQ13938 189 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 TFDP1Q14186 410 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 FIGNQ5HY92 759 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 COL13A1Q5TAT6 717 aaPredicted RBP16.31■□□□□ 0.2
CAPN3-207ENST00000397200 SLC39A5Q6ZMH5 540 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 NECAB2Q7Z6G3 386 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 SERINC5Q86VE9 423 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 ZC3H3Q8IXZ2 948 aaKnown RBP16.31■□□□□ 0.2
CAPN3-207ENST00000397200 MYOCDQ8IZQ8 938 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 DNAJB3Q8WWF6 145 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 SPIRE2Q8WWL2 714 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 KMT5AQ9NQR1 393 aa16.31■□□□□ 0.2
CAPN3-207ENST00000397200 LRRIQ4A6NIV6 560 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 SOWAHDA6NJG2 315 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 K7ENM7 598 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 RNF225M0QZC1 329 aaPredicted RBP16.3■□□□□ 0.2
CAPN3-207ENST00000397200 SLC16A4O15374 487 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 RPLP2P05387 115 aaKnown RBP16.3■□□□□ 0.2
CAPN3-207ENST00000397200 MAPTP10636 758 aaKnown RBP16.3■□□□□ 0.2
CAPN3-207ENST00000397200 CDC42EP1Q00587 391 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 PTK7Q13308 1070 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 RSPH3Q86UC2 560 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 TMTC1Q8IUR5 882 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 KSR1Q8IVT5 923 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 NME8Q8N427 588 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 DEPTORQ8TB45 409 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 IQCDQ96DY2 449 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 NLRP4Q96MN2 994 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 DNAJC7Q99615 494 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 TRPV6Q9H1D0 765 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 CAPN11Q9UMQ6 739 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 ADGRG1Q9Y653 693 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 H0YCG3 227 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 TLR3O15455 904 aaKnown RBP16.3■□□□□ 0.2
CAPN3-207ENST00000397200 B4GALT4O60513 344 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 GCNT3O95395 438 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 SRGAP2CP0DJJ0 459 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 EN2P19622 333 aaPredicted RBP16.3■□□□□ 0.2
CAPN3-207ENST00000397200 NMT1P30419 496 aaKnown RBP16.3■□□□□ 0.2
CAPN3-207ENST00000397200 NCKAP1LP55160 1127 aa16.3■□□□□ 0.2
CAPN3-207ENST00000397200 MTF1Q14872 753 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms