RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 SPDYCQ5MJ68 293 aa15.83■□□□□ 0.13
CCNF-202ENST00000397066 WLSQ5T9L3 541 aa15.83■□□□□ 0.13
CCNF-202ENST00000397066 EPM2AIP1Q7L775 607 aaPredicted RBP15.83■□□□□ 0.13
CCNF-202ENST00000397066 C1orf54Q8WWF1 131 aa15.83■□□□□ 0.13
CCNF-202ENST00000397066 ZSWIM1Q9BR11 485 aa15.83■□□□□ 0.13
CCNF-202ENST00000397066 ATP6V0A4Q9HBG4 840 aa15.83■□□□□ 0.13
CCNF-202ENST00000397066 COG5Q9UP83 839 aa15.83■□□□□ 0.13
CCNF-202ENST00000397066 USP15Q9Y4E8 981 aaPredicted RBP15.83■□□□□ 0.13
CCNF-202ENST00000397066 NCANO14594 1321 aa15.83■□□□□ 0.13
CCNF-202ENST00000397066 RREB1Q92766 1687 aa15.83■□□□□ 0.13
CCNF-202ENST00000397066 TBX3O15119 743 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 DLATP10515 647 aaKnown RBP15.83■□□□□ 0.12
CCNF-202ENST00000397066 SHMT1P34896 483 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 ACCSLQ4AC99 568 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 SGO2Q562F6 1265 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 SPICE1Q8N0Z3 855 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 KLHL14Q9P2G3 628 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 MYO3BQ8WXR4 1341 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 MYH14Q7Z406 1995 aaKnown RBP15.83■□□□□ 0.12
CCNF-202ENST00000397066 TMEM120BA0PK00 339 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 RIPK2O43353 540 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 GDF11O95390 407 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 RNF207Q6ZRF8 634 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 FAM228AQ86W67 206 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 PRELID2Q8N945 189 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 ZNF653Q96CK0 615 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 BTBD6Q96KE9 485 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 CCDC17Q96LX7 622 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 TRIM7Q9C029 511 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.83■□□□□ 0.121e-6■■□□□ 12.6
CCNF-202ENST00000397066 SCN7AQ01118 1682 aa15.83■□□□□ 0.12
CCNF-202ENST00000397066 MGRN1O60291 552 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 GSTA1P08263 222 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 PPATQ06203 517 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 TBC1D10BQ4KMP7 808 aaPredicted RBP15.82■□□□□ 0.12
CCNF-202ENST00000397066 ETNPPLQ8TBG4 499 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 TBC1D16Q8TBP0 767 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 SEC14L1Q92503 715 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 ZNF317Q96PQ6 595 aaPredicted RBP15.82■□□□□ 0.12
CCNF-202ENST00000397066 ZBTB21Q9ULJ3 1066 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 DOT1LQ8TEK3 1739 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 CCDC88AQ3V6T2 1871 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 EML1O00423 815 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 IGF2BP3O00425 579 aaKnown RBP eCLIP15.82■□□□□ 0.12
CCNF-202ENST00000397066 IL1R1P14778 569 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 GJC1P36383 396 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 ADCY8P40145 1251 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 MIEF2Q96C03 454 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 NOP53Q9NZM5 478 aaKnown RBP15.82■□□□□ 0.12
CCNF-202ENST00000397066 EMSYQ7Z589 1322 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 MEIS2O14770 477 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 VCAM1P19320 739 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 COILP38432 576 aaPredicted RBP15.82■□□□□ 0.12
CCNF-202ENST00000397066 POU5F1Q01860 360 aaKnown RBP15.82■□□□□ 0.12
CCNF-202ENST00000397066 SLC30A5Q8TAD4 765 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 FAM163AQ96GL9 167 aaPredicted RBP15.82■□□□□ 0.12
CCNF-202ENST00000397066 CCDC77Q9BR77 488 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 AGPAT3Q9NRZ7 376 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 POLLQ9UGP5 575 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 CNOT7Q9UIV1 285 aaKnown RBP15.82■□□□□ 0.12
CCNF-202ENST00000397066 ANP32DO95626 131 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 INTS8Q75QN2 995 aaKnown RBP15.82■□□□□ 0.12
CCNF-202ENST00000397066 MICAL1Q8TDZ2 1067 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 ATXN2LQ8WWM7 1075 aaKnown RBP15.82■□□□□ 0.12
CCNF-202ENST00000397066 TEKT1Q969V4 418 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 NUP85Q9BW27 656 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 SLC24A3Q9HC58 644 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 TCEAL9Q9UHQ7 104 aa15.82■□□□□ 0.12
CCNF-202ENST00000397066 CYP3A7-CYP3A51PA0A087WV96 503 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 RARGP13631 454 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 CYP3A7P24462 503 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 BFSP1Q12934 665 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 ZDHHC24Q6UX98 284 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 DDX23Q9BUQ8 820 aaKnown RBP15.81■□□□□ 0.12
CCNF-202ENST00000397066 OLFML3Q9NRN5 406 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 COL22A1Q8NFW1 1626 aaPredicted RBP15.81■□□□□ 0.12
CCNF-202ENST00000397066 EIF3DO15371 548 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCNF-202ENST00000397066 DIAPH2O60879 1101 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 PYGMP11217 842 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 BRAFP15056 766 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 NQO1P15559 274 aaKnown RBP15.81■□□□□ 0.12
CCNF-202ENST00000397066 RWDD2BP57060 319 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 KCNJ2P63252 427 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 AUHQ13825 339 aaKnown RBP15.81■□□□□ 0.12
CCNF-202ENST00000397066 VSIG1Q86XK7 387 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 ZNF564Q8TBZ8 553 aaPredicted RBP15.81■□□□□ 0.12
CCNF-202ENST00000397066 CCHCR1Q8TD31 782 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 DCAF4Q8WV16 495 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 ROBO1Q9Y6N7 1651 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 NHSL1Q5SYE7 1610 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 PHLPP1O60346 1717 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 RPTORQ8N122 1335 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 MYH4Q9Y623 1939 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 GABPAQ06546 454 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 SYDE2Q5VT97 1194 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 MKNK1Q9BUB5 465 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 MTFR1LQ9H019 292 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 WNT8AQ9H1J5 351 aa15.81■□□□□ 0.12
CCNF-202ENST00000397066 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCNF-202ENST00000397066 GAKO14976 1311 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms