RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 STBD1O95210 358 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 CTSAP10619 480 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 KLRC2P26717 231 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 RBM10P98175 930 aaKnown RBP18.23■□□□□ 0.51
DDR1-229ENST00000396342 CTTNQ14247 550 aaKnown RBP18.23■□□□□ 0.51
DDR1-229ENST00000396342 NPY5RQ15761 445 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 PTPN21Q16825 1174 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 KIAA1841Q6NSI8 718 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 FERMT3Q86UX7 667 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 PLCD3Q8N3E9 789 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 VN1R2Q8NFZ6 395 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 ERMNQ8TAM6 284 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 ACSF2Q96CM8 615 aaPredicted RBP18.23■□□□□ 0.51
DDR1-229ENST00000396342 TMEM175Q9BSA9 504 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 MRPL17Q9NRX2 175 aaKnown RBP18.23■□□□□ 0.51
DDR1-229ENST00000396342 ANKEF1Q9NU02 776 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 RGL1Q9NZL6 768 aa18.23■□□□□ 0.51
DDR1-229ENST00000396342 URODP06132 367 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 GALTP07902 379 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 SP100P23497 879 aaPredicted RBP18.22■□□□□ 0.51
DDR1-229ENST00000396342 NEK4P51957 841 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 PTPN5P54829 565 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 MTMR3Q13615 1198 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 RARS2Q5T160 578 aaKnown RBP18.22■□□□□ 0.51
DDR1-229ENST00000396342 UBALD2Q8IYN6 164 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 FBXL6Q8N531 539 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 TDRD5Q8NAT2 981 aaKnown RBP18.22■□□□□ 0.51
DDR1-229ENST00000396342 OXER1Q8TDS5 423 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 CEP89Q96ST8 783 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 EIF2AK1Q9BQI3 630 aaKnown RBP18.22■□□□□ 0.51
DDR1-229ENST00000396342 S1PR5Q9H228 398 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 NRDE2Q9H7Z3 1164 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 TTC12Q9H892 705 aaPredicted RBP18.22■□□□□ 0.51
DDR1-229ENST00000396342 IFT122Q9HBG6 1241 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 IRAK3Q9Y616 596 aa18.22■□□□□ 0.51
DDR1-229ENST00000396342 MYH9P35579 1960 aaKnown RBP18.22■□□□□ 0.51
DDR1-229ENST00000396342 TXKP42681 527 aa18.21■□□□□ 0.51
DDR1-229ENST00000396342 SYCE2Q6PIF2 218 aa18.21■□□□□ 0.51
DDR1-229ENST00000396342 HAS1Q92839 578 aa18.21■□□□□ 0.51
DDR1-229ENST00000396342 GTF3C6Q969F1 213 aa18.21■□□□□ 0.51
DDR1-229ENST00000396342 FBXL18Q96ME1 805 aa18.21■□□□□ 0.51
DDR1-229ENST00000396342 ZBP1Q9H171 429 aa18.21■□□□□ 0.51
DDR1-229ENST00000396342 SSBP05455 408 aaKnown RBP eCLIP18.2■□□□□ 0.5
DDR1-229ENST00000396342 NCLP19338 710 aaKnown RBP18.2■□□□□ 0.5
DDR1-229ENST00000396342 OR1G1P47890 313 aa18.2■□□□□ 0.5
DDR1-229ENST00000396342 SLC11A1P49279 550 aa18.2■□□□□ 0.5
DDR1-229ENST00000396342 POU5F1BQ06416 359 aa18.2■□□□□ 0.5
DDR1-229ENST00000396342 NR5A1Q13285 461 aa18.2■□□□□ 0.5
DDR1-229ENST00000396342 MRPL10Q7Z7H8 261 aaKnown RBP18.2■□□□□ 0.5
DDR1-229ENST00000396342 ALYREFQ86V81 257 aaKnown RBP18.2■□□□□ 0.5
DDR1-229ENST00000396342 DIS3L2Q8IYB7 885 aaKnown RBP18.2■□□□□ 0.5
DDR1-229ENST00000396342 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
DDR1-229ENST00000396342 COLEC11Q9BWP8 271 aa18.2■□□□□ 0.5
DDR1-229ENST00000396342 SFXN1Q9H9B4 322 aa18.2■□□□□ 0.5
DDR1-229ENST00000396342 SORCS3Q9UPU3 1222 aa18.2■□□□□ 0.5
DDR1-229ENST00000396342 SLITRK3O94933 977 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 LYPLA2O95372 231 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 POMCP01189 267 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 ADH1AP07327 375 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 XRCC6P12956 609 aaKnown RBP eCLIP18.19■□□□□ 0.5
DDR1-229ENST00000396342 FOSBP53539 338 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 KCNC3Q14003 757 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 ZBTB8OSQ8IWT0 167 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 MCPH1Q8NEM0 835 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 RPS6KC1Q96S38 1066 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 MFSD1Q9H3U5 465 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 GJB4Q9NTQ9 266 aa18.19■□□□□ 0.5
DDR1-229ENST00000396342 REV3LO60673 3130 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 ATP2B1P20020 1258 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 PTENP60484 403 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 NHLH1Q02575 133 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 AGMOQ6ZNB7 445 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 CCDC149Q6ZUS6 474 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 OTOP3Q7RTS5 596 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 APBB1IPQ7Z5R6 666 aaPredicted RBP18.18■□□□□ 0.5
DDR1-229ENST00000396342 ZNF579Q8NAF0 562 aaKnown RBP18.18■□□□□ 0.5
DDR1-229ENST00000396342 KREMEN2Q8NCW0 462 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 AUTS2Q8WXX7 1259 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 APOL6Q9BWW8 343 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 CSRNP2Q9H175 543 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 DNAJB4Q9UDY4 337 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
DDR1-229ENST00000396342 GIT1Q9Y2X7 761 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 EVPLQ92817 2033 aa18.18■□□□□ 0.5
DDR1-229ENST00000396342 LRRIQ4A6NIV6 560 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 BTBD18B2RXH4 712 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 NRP1O14786 923 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 CREMQ03060 361 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 ME3Q16798 604 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 ZNF280BQ86YH2 543 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 FAM184AQ8NB25 1140 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 STAMQ92783 540 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 NACC1Q96RE7 527 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 POMKQ9H5K3 350 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 WRAP73Q9P2S5 460 aaPredicted RBP18.17■□□□□ 0.5
DDR1-229ENST00000396342 NOL7Q9UMY1 257 aaKnown RBP18.17■□□□□ 0.5
DDR1-229ENST00000396342 USTQ9Y2C2 406 aa18.17■□□□□ 0.5
DDR1-229ENST00000396342 PRG3Q9Y2Y8 225 aaPredicted RBP18.17■□□□□ 0.5
DDR1-229ENST00000396342 IPPQ9Y573 584 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms